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This page represents a portion of the MGH/CVRC Zebrafish Server content, originally hosted at http://zebrafish.mgh.harvard.edu. |
Bulk Segregant Markers
These markers are suggested for first-pass mapping.
Marker Display Format
Bulk Segregant Protocols
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Bulk Segregant Marker List
marker_id | linkage_group | map_position |
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1 | 3.5 | |
1 | 13.4 | |
1 | 24.3 | |
1 | 32.6 | |
1 | 39 | |
1 | 51 | |
1 | 61.4 | |
1 | 72.6 | |
1 | 77.7 | |
1 | 85.1 | |
2 | 4.9 | |
2 | 24.8 | |
2 | 38.3 | |
2 | 44.3 | |
2 | 58.2 | |
2 | 68.7 | |
2 | 81.5 | |
2 | 86.2 | |
3 | 17.6 | |
3 | 30.5 | |
3 | 45.4 | |
3 | 59.6 | |
3 | 64.9 | |
3 | 78.2 | |
3 | 100.6 | |
3 | 108.7 | |
3 | 116.9 | |
4 | 9.3 | |
4 | 15.6 | |
4 | 26 | |
4 | 36.7 | |
4 | 42.6 | |
4 | 44.9 | |
4 | 61.6 | |
4 | 75.7 | |
5 | 3.5 | |
5 | 17.1 | |
5 | 28.2 | |
5 | 40.9 | |
5 | 50.3 | |
5 | 60.9 | |
5 | 72.7 | |
5 | 83.1 | |
5 | 96 | |
5 | 103 | |
6 | 3.5 | |
6 | 14.5 | |
6 | 25.2 | |
6 | 39.5 | |
6 | 53.6 | |
6 | 67.9 | |
6 | 81.1 | |
6 | 89.3 | |
7 | 1.9 | |
7 | 8.9 | |
7 | 24 | |
7 | 36.7 | |
7 | 52.2 | |
7 | 60.6 | |
7 | 70.5 | |
7 | 83.7 | |
7 | 98.3 | |
8 | 4.9 | |
8 | 18.2 | |
8 | 30.5 | |
8 | 39.9 | |
8 | 49.3 | |
8 | 62.3 | |
8 | 79.3 | |
8 | 100.7 | |
9 | 4.8 | |
9 | 14.3 | |
9 | 23.6 | |
9 | 37.1 | |
9 | 48.8 | |
9 | 70.1 | |
9 | 86.7 | |
9 | 94.9 | |
10 | 0 | |
10 | 4.7 | |
10 | 13.4 | |
10 | 27.9 | |
10 | 48.7 | |
10 | 58.1 | |
10 | 66.2 | |
10 | 78.3 | |
10 | 92.5 | |
11 | 0 | |
11 | 8.6 | |
11 | 22.6 | |
11 | 24 | |
11 | 36.9 | |
11 | 47.9 | |
11 | 56.6 | |
11 | 65.9 | |
11 | 73.1 | |
12 | 1.3 | |
12 | 6.3 | |
12 | 22.3 | |
12 | 30.4 | |
12 | 41 | |
12 | 51.5 | |
12 | 62 | |
12 | 69.1 | |
12 | 78.7 | |
13 | 6.2 | |
13 | 21.8 | |
13 | 25.2 | |
13 | 40 | |
13 | 51.5 | |
13 | 57.3 | |
13 | 80.7 | |
14 | 4.2 | |
14 | 13.9 | |
14 | 23.3 | |
14 | 36.5 | |
14 | 51.7 | |
14 | 62.5 | |
14 | 82 | |
14 | 93.8 | |
15 | 7.3 | |
15 | 18.9 | |
15 | 34.1 | |
15 | 49.3 | |
15 | 57.9 | |
15 | 67.4 | |
15 | 79.6 | |
15 | 87.5 | |
15 | 98.2 | |
16 | 4.8 | |
16 | 15 | |
16 | 27.7 | |
16 | 34.9 | |
16 | 43.4 | |
16 | 50.6 | |
16 | 59 | |
16 | 67.2 | |
16 | 78.9 | |
17 | 5.9 | |
17 | 20 | |
17 | 33.5 | |
17 | 44.5 | |
17 | 53.4 | |
17 | 68.1 | |
17 | 81.1 | |
17 | 85.8 | |
18 | 7.3 | |
18 | 14.6 | |
18 | 21.5 | |
18 | 35.5 | |
18 | 43.4 | |
18 | 52.4 | |
18 | 62 | |
18 | 75.4 | |
19 | 1.1 | |
19 | 9.5 | |
19 | 19.1 | |
19 | 26 | |
19 | 38.3 | |
19 | 48.8 | |
19 | 59.4 | |
19 | 69.1 | |
19 | 81.5 | |
20 | 7.9 | |
20 | 21.2 | |
20 | 30.6 | |
20 | 38.9 | |
20 | 55.7 | |
20 | 67.5 | |
20 | 77.8 | |
20 | 92.3 | |
20 | 107.2 | |
20 | 117.1 | |
21 | 3.7 | |
21 | 13.8 | |
21 | 21.9 | |
21 | 35 | |
21 | 40.8 | |
21 | 49.4 | |
21 | 110 | |
21 | 120.5 | |
21 | 129.7 | |
22 | 0 | |
22 | 6.8 | |
22 | 17.2 | |
22 | 26.7 | |
22 | 35 | |
22 | 55.8 | |
22 | 59.2 | |
22 | 68.6 | |
23 | 1.1 | |
23 | 9.4 | |
23 | 16.6 | |
23 | 30.5 | |
23 | 36.6 | |
23 | 46 | |
23 | 54.4 | |
23 | 60.1 | |
24 | 1.2 | |
24 | 2.5 | |
24 | 16.6 | |
24 | 36 | |
24 | 53.5 | |
24 | 62.9 | |
24 | 73.3 | |
24 | 76.9 | |
25 | 5.1 | |
25 | 9.8 | |
25 | 28.2 | |
25 | 40.3 | |
25 | 48.5 | |
25 | 59.9 | |
25 | 65.7 | |
25 | 71.7 |
= 214 markers
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STS Markers for Bulk Segregant Analysis
These tables show the markers currently being used for bulk segregant analysis. Plain numbers refer to "Z markers".
Plate 1 (lg1-lg14)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
A | 22347 | 6283 | 6802 | 9920 | 20533 | 1525 | 1052 | 6867 | 22270 | 8032 | 10727 | 1400 |
B | 9704 | 1351 | 6974 | 11496 | 8921 | 6614 | 11001 | 4956 | 8770 | 10225 | 8450 | 22103 |
C | 5508 | 3705 | 6818 | 20915 | 5538 | 22250 | 7564 | 10789 | 4168 | 1473 | 6920 | 4568 |
D | 7358 | 13521 | 13475 | 4299 | 1454 | 1701 | 4673 | 6268 | 10130 | 5643 | 9951 | 6104 |
E | 13620 | 22747 | 1185 | 880 | 10914 | 11919 | 14193 | 13219 | 11911 | 6259 | 17223 | 6657 |
F | 3439 | 9257 | 10934 | 13614 | 9230 | 10785 | 3835 | 8146 | 7262 | 4252 | 5436 | 3259 |
G | 17222 | 7486 | 20317 | 8252 | 10441 | 1059 | 9208 | 3362 | 13411 | 5435 | 1257 |
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H | 20450 | 11250 | 6908 | 8156 | 1239 | 13880 | 6909 | 13395 | 4353 | 9366 | 6666 |
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Plate 2 (lg15-lg25)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
A | 7216 | 7381 | 13230 | 11944 | 7654 | 5183 | 9516 | 3093 | 13223 |
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B | 21165 | 6895 | 21982 | 9384 | 7686 | 3816 | 10321 | 9084 | 3286 |
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C | gof18 | 15453 | 6984 | 3782 | 4825 | 4374 | 6376 | 4003 | 20039 |
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D | 8731 | 3104 | 6921 | 8554 | 7171 | 20046 | 5141 | 6017 | 10949 |
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E | 9881 | 13202 | 381 | 3211 | 3824 | 10056 | 5075 | 5413 | 23011 |
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F | 9692 | 21703 | 3165 | 9334 | 9708 | 1497 | 13229 | 9325 | 20051 |
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G | 22674 | 6454 | 9941 | gof16 | 4425 | 10432 | 11092 | 13232 | 8224 |
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H | 8343 | 20605 | 8488 | 6089 | 7925 | 7405 | 3528 | 1213 | 8780 |
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Plate 3 (telomeric markers, all but lg13)* arranged for analysis of 1 pool (lg15-lg25)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 |
A | 13296 | 4593 | 15410 | 4278 | 3929 | 3100 | 3275 | 10983 | 3314 | 1813 | 15448 | gof2 |
B | 191 | 8218 | 8703 | 20106 | 13221 | 20860 | 6754 | 6427 | 3952 | 11160 | 1312 | 7576 |
C | 1523 | 11837 | 5223 | 9041 | 3126 | 1642 | 1928 | 6010 | 6572 | 11685 | 1651 | 1625 |
D | 22144 | 6804 | 10508 | 13719 | 11752 | 4682 | 5683 | 20133 | 7627 | 11862 | 6924 | 1431 |
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