Linkage Group 14 SSR Markers
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We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.
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Marker | Linkage | Forward Primer Sequence | Length | Reverse Primer Sequence | Length | AB_1 | AB_2 | In_1 | In_2 | Comments | dbSTS |
|---|---|---|---|---|---|---|---|---|---|---|---|
Z1197A | 14 | AGTGTGTAGTCCTGCTGCGGG | 21 | ATCCTAGCTGGTAAGGCAGGGC | 22 | NA | NA | NA | NA | Use at your | |
Z4 | 14 | TCAGAGGAGCGCATGAAAGT | 20 | CTGAAAACACCCATCACGTG | 20 | 81 | 129 | 95 | 99 |
|
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Z618 | 14 | CCTTTCACACTATACAGCGTATCA | 24 | TCTTCTGGGGTTTACTGCTCA | 21 | NA | NA | NA | NA |
| |
Z697 | 14 | AAAGTGTTACCGGGCAACAG | 20 | GGGTTAGCATGTGGGCTG | 18 | NA | NA | NA | NA |
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Z879 | 14 | TGAGGAGGTTTGTCACCACA | 20 | TGAAAAAAACACCAAGCGC | 19 | NA | NA | NA | NA |
| |
Z974 | 14 | AGCTCCAGCCCTACAACTACC | 21 | TGAAGTTCAGACTAATGATCTCGC | 24 | NA | NA | NA | NA |
| |
Z1226 | 14 | AAGTTTGCACATTACCATCGG | 21 | GCCGAGGCAAATATTTTCAA | 20 | NA | NA | NA | NA |
| |
Z1257 | 14 | AAAAATGTCAGTCTTTCATATGCG | 24 | GAGTCCTCTCAGGCAGCG | 18 | 123 |
| 117 |
|
| |
Z1396 | 14 | TCAGCCACTCCTTCAGTGCG | 20 | AGCGTCCTTCAGAACCTCATGG | 22 | 153 |
| 141 |
| Use at your | |
Z1523 | 14 | GATCACAGCCGCTTCGTCAA | 20 | CCAAACCATTCAGACTGGATGA | 22 | NA | NA | NA | NA |
| |
Z1536 | 14 | TCATATCTTTATCTCAGAGATGTGCG | 26 | GCACACATCTGGGGAAAACT | 20 | 199 |
| 195 | 213 |
| |
Z1652 | 14 | CTGGTAAAGTGTCAGGTTGCGA | 22 | CGCGCTGGCACCTGCAGC | 18 | NA | NA | NA | NA |
| |
Z1688 | 14 | GAGCAGAGCCTCTTACCACTCC | 22 | TGGAAAAACCACCCTTGGAG | 20 | NA | NA | NA | NA |
| |
Z1796 | 14 | AGACACGGGACAGCTGGGTC | 20 | TAGTTGGCGGTTCATTCCGC | 20 | 228 |
| 230 |
| Use at your |
|
Z1801 | 14 | GATCACTGAGGAAGCGCACC | 20 | CCATCAGTATTTCAGACACCGC | 22 | NA | NA | NA | NA |
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Z1812 | 14 | TAAATGGCCATGATTGTCCGC | 21 | TCCAAGTTGTCTGACTGGGGC | 21 | NA | NA | NA | NA |
|
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Z1818 | 14 | TTCCCGCCACAACCCAGTAT | 20 | ACTGATCAACTACACTGGCCGC | 22 | NA | NA | NA | NA | Use at your |
|
Z3091 | 14 | CAAGACCCAAAAAGTGCATTGC | 22 | CAAGTTCAGTGGGCCTGCCT | 20 | NA | NA | NA | NA |
| |
Z3259 | 14 | TCTCAAAAGCAGATCAGACGCA | 22 | TCCACAGCGATAGTGCCCAA | 20 | 142 | 160 | 176 |
|
| |
Z3290 | 14 | TCCTGGGTGCACAAGAAAACTG | 22 | GTCCCCACATCCTCGCAAAC | 20 | NA | NA | NA | NA |
|
|
Z3703 | 14 | CTGTTTGACGTGTCGCCCTG | 20 | AGCCGTGTGGATTACAGCACA | 21 | NA | NA | NA | NA | Use at your |
|
Z3868 | 14 | TGCTGCTTATGTAGGTGGCAGG | 22 | TGGATGATTGTTTTGGACTGCC | 22 | 153 |
| 123 | 145 |
| |
Z3872 | 14 | ACATCAGGAAGGCAGCTGGG | 20 | AATGCACACTCGCCTCCTCC | 20 | NA | NA | NA | NA |
|
|
Z3984 | 14 | TGCTCATGCTTGAACTCTGCG | 21 | TCCACAAAAACCACATGATGGA | 22 | 141 |
| 135 |
|
| |
Z4203 | 14 | AAGGCTGTTGTCCTCGATTGG | 21 | TCCAGCGCACTGCTATGAGG | 20 | NA | NA | NA | NA |
| |
Z4291 | 14 | TTTGCTCCTCTGGACAGCACC | 21 | CCCCGAGCAGCATCACCTAC | 20 | 147 |
| 135 | 159 |
| |
Z4592 | 14 | CCTCTGACTGAACCGAGTACGG | 22 | GCGCAGTTCACTGGTTTAACCC | 22 | NA | NA | NA | NA |
| |
Z4664 | 14 | TCCCACATCTTCGCAAACAG | 20 | TCCTGGGTGCACAAGAAATCTG | 22 | NA | NA | NA | NA |
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Z4701 | 14 | ACAGGAGCGAATCTCACCCG | 20 | CCAACCACAGGTATCCTGAGCC | 22 | NA | NA | NA | NA |
| |
Z4896 | 14 | AAGCGCTTTGAGTGCCCAGA | 20 | TTTCCCTGTAACAACAGCACGG | 22 | 137 |
| 131 | 139 |
| |
Z5195 | 14 | AGCCCTCCAAGATTTAATCGCC | 22 | TTAAATGCGCCGAGGCAAAT | 20 | NA | NA | NA | NA |
| |
Z5297 | 14 | GTTCATTCCACTGTGGCGACC | 21 | AGGATCCAACACCAACCAGACC | 22 | NA | NA | NA | NA | Use at your | |
Z5435 | 14 | CCTTGTGCCCCTCAAATGCG | 20 | GTCATGGGAGGGAATGGTGC | 20 | NA | NA | NA | NA |
| |
Z5436 | 14 | TGGCAGAGTGAACAATGCAGTG | 22 | GTTTTTTTTCACACCCCATTGC | 22 | NA | NA | NA | NA |
| |
Z6011 | 14 | TCCCCACCAGGATATAGGAA | 20 | TGATTTACAGCCATGTCGGA | 20 | 167 | 179 | 127 |
|
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Z6204 | 14 | TCAAGGTCACGTCACTTTTACA | 22 | AGTGTTTACCTGTCAGACACGC | 22 | 297 |
| 201 |
|
| |
Z6545 | 14 | GTGCATTGTCCTGGTCATTG | 20 | AGCGCTGTTCATCATCTCCT | 20 | 106 |
| 100 | 116 |
| |
Z6607 | 14 | GAAACCATCATGACACACTGAA | 22 | CATCAGCGGTTTGAGGAATT | 20 | 127 | 133 | 129 |
|
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Z6666 | 14 | TGCTGCTGATGATGTGACAA | 20 | TTTAATAGGTCACAGCACACGC | 22 | 163 | 235 | 337 |
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Z6667 | 14 | TGCAAAATATCACACGGATCA | 21 | CAATTCACCTGTACCGCATG | 20 | 265 |
| 263 | 301 |
| |
Z6674 | 14 | GTATCCCTGTGCCAGCAACT | 20 | ATTCCTGACTTGCCATCGAT | 20 | 148 |
| 152 |
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Z6756 | 14 | TGATTTACAGCCATGTCGGA | 20 | CCTATGAGTGTCCCCACCAG | 21 | 179 | 189 | 137 |
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Z6847 | 14 | CGAGAACAGAAATCAGAGAGCA | 22 | AAGCCAAACCATAGTGTGCC | 20 | ? | ? | ? |
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Z7030 | 14 | ACAGGAATTGGCAGTCATCC | 20 | GATGAACCCTTGACCCTCAA | 20 | 123 | 127 | 121 |
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Z7043 | 14 | TGCACATTCCTTCCAGAACA | 20 | GCCAGAAAACTGAGCAGACC | 20 | 195 |
| 189 |
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Z7108 | 14 | TGAGTGAGTCTGGCTGCATC | 20 | ATTAGAGGAATGTGGTGCGC | 20 | 94 | 130 | 92 |
|
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Z7495 | 14 | TTCAGAAAACCTCCCCTGTG | 20 | CCACCACTCCTGGACTTGTT | 20 | 124 |
| 108 | 116 |
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Z7673 | 14 | TGAAGCCAATCGCTCAGTC | 19 | AAAGGGACTAACCCGAAGGA | 20 | 287 |
| 225 | 255 |
| |
Z7687 | 14 | CATTTTCAAAGCGAGTGAAGG | 21 | CTGGATGCAGAGCCCTATGT | 20 | 102 |
| 110 | 144 |
| |
Z7811 | 14 | TCCTCCTGCTCCTATGCTGT | 20 | CAGATGCACTGCAGTGATGA | 20 | 207 |
| 189 | n |
| |
Z8149 | 14 | TTGGGTCACTGTGAGGATCA | 20 | AGGTGAGGTGGATGATCCTG | 20 | NA | NA | NA | NA |
| |
Z8435 | 14 | TTTGCCTCTTTTCTGAGGGA | 20 | ACGCATTGCAACCAATAACA | 20 | 164 | 166 | 170 |
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Z8471 | 14 | CGAATGGACTCGTCCTTCAT | 20 | GAATTTGCATCAGTTTGACTGAA | 23 | 232 |
| 204 |
|
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Z8801 | 14 | TCAATACACCCAGTGCCAAA | 20 | GAGGGCTCTGAATTCCTTCC | 20 | 231 |
| 223 | 229 |
| |
Z8806 | 14 | GCAGCAGGTTAGTATTCCCC | 20 | TTGTCAGCGAGTGACAGACC | 20 | 151 |
| 93 |
|
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Z8873 | 14 | AAGACACACATGCAAAAGCG | 20 | TCTCTGGCTGTCATTGTGCT | 20 | 193 | 195 | 171 | 175 |
| |
Z9017 | 14 | GGGGACTGAGTCATTTTCCA | 20 | GGCCCAAAGAACCCAGATAT | 20 | 142 |
| 212 |
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Z9054 | 14 | AGTGGGAAAACATGTGAGACG | 21 | TCTTTCCTGCGTGGATGAG | 19 | 155 |
| 157 |
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Z9057 | 14 | CAGAAACATTCCATGTGCCA | 20 | CACCAGAGATCCACCCATTT | 20 | 146 |
| 214 |
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Z9060 | 14 | CATTCAGAGCGAGGTGAACA | 20 | GCAGCATGATCGTGATACTG | 20 | 170 |
| 184 |
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Z9167 | 14 | GTAATTCAGTCATCATGCGCA | 21 | CTTCACGTGCAGTCGAGTGT | 20 | 109 | 117 | 111 |
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Z9180 | 14 | CTGCCTGGAAGAAGTGGAAG | 20 | CTAACCCTGACACTTCAAGCG | 21 | 149 |
| 163 |
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Z9181 | 14 | CCCTGGAGGAGAAACATTGA | 20 | CTAGAGAAACACCCCCCACA | 20 | NA | NA | NA | NA |
| |
Z9366 | 14 | ATGTACGCCTGTGTGAGCAC | 20 | AGTAAAGTGGTGTGCTTTGAAG | 22 | 116 |
| 132 |
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Z9368 | 14 | TTGCAGTCTATTTTCCACTGTG | 22 | CCCTGGAGGAGAAACATTGA | 20 | 342 |
| 324 |
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Z9720 | 14 | TCTCCGCTCGTTTGTCTTCT | 20 | CATCACACCGAGGCTGAGTA | 20 | 243 | 245 | 239 | 281 |
| |
Z9789 | 14 | CGTTGATGTCCCACAGTTTG | 20 | AATCTGCGCTGAAGTGTGTG | 20 | 195 | 215 | 203 |
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Z9857 | 14 | ACTCTCACGCATACACGCAC | 20 | CAGCTGATGTCCACATGATAGC | 22 | 217 |
| 223 |
|
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Z9908 | 14 | GTTCTCAGGTCAGCTGGAGG | 20 | GGGTCGAGAACTGGACAGAA | 20 | 196 |
| 194 | 198 |
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Z11305 | 14 | AATGCTCCTGTCACAGTCCC | 20 | AACAAACAGCTGCAATGCAC | 20 | 181 |
| 185 | 189 |
| |
Z11392 | 14 | ATCAGTCCTGCTGATCCTGG | 20 | GCCAAAACTACACCTGCACA | 20 | 127 |
| 137 |
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Z11437 | 14 | GCCTGGCTGACTTTCTGAAC | 20 | GGCCGAGGTGTTATATTGGA | 20 | 148 |
| 140 |
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Z11513 | 14 | AAAGTTTCCAGGGCAAAGGT | 20 | TTTCCATGTGTTGTGCCACT | 20 | 170 | 190 | 180 | 186 |
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Z11694 | 14 | GTGCTGTTACACCTCCAGCA | 20 | CCAACGGGATCCACTGAG | 18 | 195 |
| 205 | 209 |
| |
Z11725 | 14 | GCTTCCAGAAGTGGAGCAAC | 20 | TGATTTTGATTGGGGACCAT | 20 | ? |
| ? |
|
| |
Z11837 | 14 | ACAAAGGAGGACGAGTGGTG | 20 | TCATGCAGACCACTCAGAGC | 20 | 130 | 138 | 150 |
|
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Z13271 | 14 | AACAATACTGAACGGTGAGCG | 21 | TCTTCCCGGAGTCATCCTC | 19 | 147 |
| 151 | ? |
| |
Z13401 | 14 | TGCATTATAGGGTGAGCTTGTG | 22 | GAGAAAATGGGCTCTGCTTG | 20 | 295 |
| 301 | 307 |
| |
Z13590 | 14 | GGAGCAGAGAAAGGTGGAAA | 20 | AGAAACGCCTGGAACGCT | 18 | 280 |
| 188 |
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Z13656 | 14 | ATAATAACACGCGCCTGACC | 20 | GCATGGGATTTTCATTTTGC | 20 |
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Z13787 | 14 | GCGGATCATGCTAGAAAAGC | 20 | TGTGTTACATTCCAGCAGGC | 20 | 168 |
| 170 |
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Z14027 | 14 | TCTGGAGCTGAGAGTGCTGA | 20 | TGTCTGAACACTGACGCACA | 20 | NA | NA | NA | NA |
| |
Z17288 | 14 | GACCCCCTGAATGCACAC | 18 | AGTGGCCAACACAAAAGACC | 20 | 152 |
| 164 |
|
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Z20072 | 14 | ACTGTGTGCACATCACCTCC | 20 | CTGGCGCTCACACTGTATGT | 20 | 180 | n | 186 |
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Z20103 | 14 | ATAGACAGCACCGGTCAACC | 20 | TGGCGGTGAGTGTCATTTAC | 20 | ? | ? | ? | ? |
| |
Z20214 | 14 | AAAACGCTTTTCACACCTGC | 20 | CCAGATGGCTCCATCAGTG | 19 | 231 |
| 225 |
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Z20488 | 14 | TGACCAGCTTCTCCTGTGTG | 20 | AGCGTGCATCTGGCTTTAGT | 20 | 156 | 168 | 166 |
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Z20545 | 14 | ACCTAAGTTGATGGCATCGG | 20 | ACTTCATTTTGCTGAGGACTG | 21 | 145 |
| 153 | 155 |
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Z20663 | 14 | GCTCAATCTGGGGAAAATCA | 20 | TGCACATACATGTTTGAGTGG | 21 | 149 |
| 145 |
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Z20763 | 14 | TGGCACTGTCCTCTGAGTTG | 20 | CATGTGGACAATTAATGGAGTCTT | 24 | 147 |
| 169 | 185 |
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Z20953 | 14 | TTCAGTCCTCAAAATTCCAACA | 22 | TTAGGTTGACTCGGATTCGG | 20 | 151 |
| 143 |
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Z21080 | 14 | AATGCTAGTGCATAGTAGTTCATGA | 25 | CGTCTTGAGGAGTTTCTGCC | 20 | 255 |
| 237 |
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Z22094 | 14 | GCAAACTGAGGCTGAGCTCT | 20 | AAGCCGTCCATCTTGGTATG | 20 | 185 | 209 | 177 |
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Z22107 | 14 | AGCGTTAGTGTGACAGGGCT | 20 | TTTTACAGCGGGGCTTACAC | 20 | 169 |
| 123 | 143 |
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Z22128 | 14 | GGAGCAGGAATTCATTTCCA | 20 | GTGGTCCATGAGTGCATCTG | 20 | 270 |
| 290 | 316 |
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Legend
Table generated Wed Oct 7 16:28:07 1998
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