Linkage Group 01 SSR Markers
We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.
Marker |
Linkage |
Forward Primer Sequence |
Length |
Reverse Primer Sequence |
Length |
AB_1 |
AB_2 |
In_1 |
In_2 |
Comments |
dbSTS |
|---|---|---|---|---|---|---|---|---|---|---|---|
Z164 |
1 |
TTGCTGTGTGTGTTTCTCAGTG |
22 |
TGTTCCATCGCTGAGAAGTG |
20 |
NA |
NA |
NA |
NA |
|
|
Z450 |
1 |
AAGTACAGCATTGTCCACAGTCA |
23 |
CAGGGAAACTGCTGATGTTG |
20 |
148 |
|
132 |
170 |
|
|
Z728 |
1 |
GTGGTCATGTGACACAGGATG |
21 |
GCTCTTACAGTCCTGAGAACAGC |
23 |
204 |
|
202 |
|
|
|
Z1142 |
1 |
CTTCACAGATTATATCCTACAA |
22 |
GTTTAGCGGCTTTTGCATCTG |
21 |
NA |
NA |
NA |
NA |
|
|
Z1154 |
1 |
TCATGATTGTTTGGAATGTAATAGTG |
26 |
TTGAGCGGTAGTCTTCTACGC |
21 |
130 |
|
138 |
202 |
|
|
Z1173 |
1 |
CAACAGTGATCACACCGACC |
20 |
CTGCCCTTCTCTGAATCAGG |
20 |
105 |
|
107 |
115 |
|
|
Z1351 |
1 |
GGTTAGTGATCAGTTAAGCAATTAGTG |
27 |
CTTTCTGAAACAGGGCCAAG |
20 |
138 |
164 |
222 |
|
|
|
Z1368 |
1 |
TTCTGCATGTGCGAGCAT |
18 |
AGCTGCATCTTGTGTCTAGCTG |
22 |
99 |
103 |
97 |
|
|
|
Z1463 |
1 |
GTGAGGTCATCCAAATAAATCTCC |
24 |
GCATTCAACCCCTGCATC |
18 |
NA |
NA |
NA |
NA |
|
|
Z1705 |
1 |
CCACAGCGGACACTTTGAACC |
21 |
CAAGGTTTACCACGGGACTGA |
21 |
NA |
NA |
NA |
NA |
|
|
Z1781 |
1 |
GCTCTGGCAGATTCCAAATTCC |
22 |
AAGGGTCAGCTGCAGGGGT |
19 |
NA |
NA |
NA |
NA |
|
|
Z1986 |
1 |
GCTGCAGCGCTGGTCACCAT |
20 |
GCTGTGGCGACCCTGGATTA |
20 |
NA |
NA |
NA |
NA |
|
|
Z3099 |
1 |
TTCTCCCGGAGTTTACATGCTG |
22 |
TTTGGTTCCTGTCAGATGCCA |
21 |
NA |
NA |
NA |
NA |
|
|
Z3417 |
1 |
TGAAAATAGGGTGCGTCTCCTT |
22 |
GCGCACATCCATTTCTCGTG |
20 |
134 |
|
116 |
132 |
|
|
Z3705 |
1 |
TTGTGATTTTTGGGCTTAGGGG |
22 |
TGTGCACCGTACTGTTTTTGGA |
22 |
NA |
NA |
NA |
NA |
|
|
Z3766 |
1 |
ACGCCTGCATCTGATGGTCA |
20 |
TCCATGCACAAAATCTCTTGCA |
22 |
168 |
|
174 |
|
|
|
Z3837 |
1 |
TGACTGCTGGAGCACAGATGC |
21 |
GCATTTCTGAACAGCCCTCC |
20 |
NA |
NA |
NA |
NA |
Use at your |
|
Z3953 |
1 |
ATGCACATTACAACCTCGAGG |
21 |
ATGTGTTCGCTATTTCCATGC |
21 |
NA |
NA |
NA |
NA |
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Legend
