Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.

Marker
Number

Linkage
Group

Forward Primer Sequence

Length

Reverse Primer Sequence

Length

AB_1
Size

AB_2
Size

In_1
Size

In_2
Size

Comments

dbSTS
Accession

Z164

1

TTGCTGTGTGTGTTTCTCAGTG

22

TGTTCCATCGCTGAGAAGTG

20

NA

NA

NA

NA

 

 

Z450

1

AAGTACAGCATTGTCCACAGTCA

23

CAGGGAAACTGCTGATGTTG

20

148

 

132

170

 

 

Z728

1

GTGGTCATGTGACACAGGATG

21

GCTCTTACAGTCCTGAGAACAGC

23

204

 

202

 

 

G40533

Z1142

1

CTTCACAGATTATATCCTACAA

22

GTTTAGCGGCTTTTGCATCTG

21

NA

NA

NA

NA

 

G41327

Z1154

1

TCATGATTGTTTGGAATGTAATAGTG

26

TTGAGCGGTAGTCTTCTACGC

21

130

 

138

202

 

G41330

Z1173

1

CAACAGTGATCACACCGACC

20

CTGCCCTTCTCTGAATCAGG

20

105

 

107

115

 

G41332

Z1351

1

GGTTAGTGATCAGTTAAGCAATTAGTG

27

CTTTCTGAAACAGGGCCAAG

20

138

164

222

 

 

G41356

Z1368

1

TTCTGCATGTGCGAGCAT

18

AGCTGCATCTTGTGTCTAGCTG

22

99

103

97

 

 

 

Z1463

1

GTGAGGTCATCCAAATAAATCTCC

24

GCATTCAACCCCTGCATC

18

NA

NA

NA

NA

 

G41380

Z1705

1

CCACAGCGGACACTTTGAACC

21

CAAGGTTTACCACGGGACTGA

21

NA

NA

NA

NA

 

 

Z1781

1

GCTCTGGCAGATTCCAAATTCC

22

AAGGGTCAGCTGCAGGGGT

19

NA

NA

NA

NA

 

 

Z1986

1

GCTGCAGCGCTGGTCACCAT

20

GCTGTGGCGACCCTGGATTA

20

NA

NA

NA

NA

 

G40145

Z3099

1

TTCTCCCGGAGTTTACATGCTG

22

TTTGGTTCCTGTCAGATGCCA

21

NA

NA

NA

NA

 

 

Z3417

1

TGAAAATAGGGTGCGTCTCCTT

22

GCGCACATCCATTTCTCGTG

20

134

 

116

132

 

 

Z3705

1

TTGTGATTTTTGGGCTTAGGGG

22

TGTGCACCGTACTGTTTTTGGA

22

NA

NA

NA

NA

 

 

Z3766

1

ACGCCTGCATCTGATGGTCA

20

TCCATGCACAAAATCTCTTGCA

22

168

 

174

 

 

G41463

Z3837

1

TGACTGCTGGAGCACAGATGC

21

GCATTTCTGAACAGCCCTCC

20

NA

NA

NA

NA

Use at your
own risk

 

Z3953

1

ATGCACATTACAACCTCGAGG

21

ATGTGTTCGCTATTTCCATGC

21

NA

NA

NA

NA

 

G41474

Z4593

1

GCGGTCAGTTGTTGATCAGTGC

22

CGTGCATGAAGCGGAAGATG

20

NA

NA

NA

NA

 

G41527

Z4764

1

CCCCTAACTGTTGACCGGTA

20

AAGAGTGAGTCTGGGTCTCCTG

22

NA

NA

NA

NA

 

G40375

Z5024

1

TGCCGTTCAGGGACTTCAAA

20

ATCTGGTGGCTGCCAAATAACA

22

150

 

244

 

 

G40379

Z5058

1

CTGACGAGAACGGTGAACATGC

22

GCTCAGGGTTTGGAGGATGTG

21

18

 

177

195

 

G40380

Z5370

1

GCCATCCAGAGCCAGAGATACA

22

ATACTGACCAGCGGGAAACTCC

22

NA

NA

NA

NA

 

G40386

Z5500

1

TTTTGTGGATGTCCTCGGCC

20

ACTCGCCTGCATGAAGCAGA

20

NA

NA

NA

NA

Use at your //
own risk

 

Z5508

1

TAGCGTGCCATGCGTTTTTG

20

GATGTTCCTGCCTTATCGGCC

21

NA

NA

NA

NA

 

G41585

Z6177

1

ATCACTGCAGGAGGCACAG

19

TATGGCCCACGATAATCAAT

20

163

 

157

 

 

G41799

Z6223

1

TCAGGTGACTGACAGCAAAG

20

TGGTGAACATGGTCCCATC

19

207

 

219

231

 

G41107

Z6283

1

TCAACACGCTTTATAGGGGG

20

TTGTGACGCCTCTGACTGTC

20

NA

NA

NA

NA

 

G39563

Z6368

1

TGTCCTATAGCCTCGCACG

19

CCGTGATCAATCATCTGCAC

20

188

 

154

 

 

G40427

Z6384

1

GTGCTTCCTCCTCAGTGTTTG

21

CGGTCGCTGATCTGATGTTA

20

152

 

124

140

 

G40429

Z6403

1

TGCTCAAGGACTGATTTTATGG

22

TGGTTGATACAGGTGGCAGA

20

236

 

230

284

 

G41116

Z6411

1

TGAGAACACATTGCTACGACG

21

ACCCCCAGAGGCATAACAG

19

274

 

258

290

 

G40432

  Z6415  

1

  TTGTTAGATCACCCTGTTGTCG  

22

  CAGACGGTTAAAAGCCAAGC  

20

  187

  

241

  339

  

G41117

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

...