Zebrafish Monoclonal Antibodies

(Source: K. Larison and B. Trevarrow from Zebrafish Book 5th Edition)

Monoclonal antibodies that recognize a variety of structures in zebrafish embryos are available from the library at the Zebrafish International Resource Center. Antibodies can be ordered online at: http://zebrafish.org/. Please feel free to communicate with ZIRC if you have any questions: zirc@zebrafish.org

The following is a partial list of monoclonal antibodies raised against zebrafish immunogens at the University of Oregon. These are available from the Zebrafish International Resource Center (http://zebrafish.org/).

Antibody Name

Isotype

Cellular Binding Site

Anatomical Structure Labeled

anti-DLX3b

IgG1,k

 

border of neural plate, otic placode, otic vesicle, olfactory epithelium, median finfold,

anti-VegT

IgG2a,k

 

adaxial cells, lateral mesoderm, prechordal plate, tail bud

zl-1

IgG1,k

cytoplasm or extracellular matrix

lens fiber cells

zm-1

IgG1,k

granular cytoplasm

actinotrichia, pectoral fins, ventral fin fold, heart, musculature system, branchial muscles, enteric musculature, extraocular musculature, abdominal musculature

zm-2

IgG1,k

granular cytoplasm

actinotrichia, meninx primitiva, dorsal fin musculature

zm-3

IgG1,k

granular cytoplasm

musculature system, branchial muscles, enteric musculature, extraocular musculature, myotomes, somites,

zm-4

IgG1,k

  

zn-1

IgG1,k

cytoplasm

axons, blastomeres, dorsal root ganglia, enteric nervous system, sensory hair cells, neurons, primary motoneurons, peripheral nervous system, Rohon-Beard neurons, YSL

zn-2

 

cell surface

ventral root, forerunner cell group, sensory hair cells, epibranchial placodes, lens, brain (neuropil), Rohon-Beard neurons, dorsal roots, trigeminal ganglion, trigeminal nerve (cranial nerve V), organs

zn-3

IgG2b,k

cell surface

cranial ganglia, meninx primitiva, enteric nervous system, pectoral fins, rhombomeres, retinal inner plexiform layer, neurons, brain (neuropil), retinal outer plexiform layer, peripheral nervous system, neurites

zn-4

IgG1,k

cytoplasm or cell surface

retinal neural layer, fins, retinal ganglion cell layer, sensory hair cells, rhombomeres, retinal inner plexiform layer, neural crest cells, neurons, brain (neuropil), epiphysis, neurites, neuromeres, gut epithelium

zn-5

IgG1,k

cell surface

subset of CNS tracts and commissures, retinal ganglion cell layer, epibranchial placodes, muscle pioneers, neural crest cells, brain (neuropil), ganglia, Rohon-Beard neurons, ventral spinal cord neurons

zn-6

IgG1,k

cell surface

dorsal spinal cord neurons, enteric nervous system, retinal ganglion cell layer, retinal inner plexiform layer, musculature system, brain (neuropil), retinal neural layer, retinal outer plexiform layer, peripheral nervous system, brain stem/spinal tracts and commissures

zn-7

IgG1

cytoplasm

brain, gut, sensory hair cells, statoacoustic (VIII) ganglion, neural crest cells, retinal neural layer, epiphysis, posterior lateral line ganglion, posterior lateral line nerve, lateral spinal cord neurons, spinal cord

zn-8

IgG1,k

cell surface

subset of brain (cellular), epibranchial placodes, horizontal myoseptum, Rohon-Beard neurons, somites, trunk mesenchyme, ventral spinal cord neurons

zn-9

IgG1,k

cell surface (question)

enteric nervous system, fins, hindbrain (hindbrain neuropil), fourth ventricle, retinal outer plexiform layer, peripheral nervous system, lateral spinal cord neurons, trigeminal ganglion, trigeminal nerve (cranial nerve V)

zn-10

IgG1

 

dorsal root ganglion, enteric nervous system, sensory hair cells, retinal inner plexiform layer, neurons, brain (neuropil), retinal neural layer, peripheral nervous system, YSL

zn-11

IgG2b

 

dorsal root ganglion, EVL, retinal ganglion cell layer, sensory hair cells, rhombomeres, neurons, brain (neuropil), epiphysis, ganglia

zn-12

IgG1,k

cell surface

cranial ganglia, dorsal spinal cord neurons, enteric nervous system, dorsal fin, ventral fin, epibranchial placodes, musculature system, myotome, retinal neural layer, Rohon-Beard neurons

zn-13

IgM

cell surface

dorsal spinal cord neurons, enteric nervous system, sensory hair cells, musculature system, myotomes, neuropil, Rohon-Beard neurons, trigeminal ganglion, trigeminal nerve (cranial nerve V)

zn-14

IgM

cell surface

sensory hair cells, rhombomeres, retinal inner plexiform layer, neural crest cells, brain (neuropil and cellular), retinal outer plexiform layer, peripheral nervous system, unidentified cell types on spinal cord surface

zn-15

IgG1,k

cytoplasm or cell surface (question)

brain vasculature, central nervous system, enteric nervous system, sensory hair cells, rhombomeres, retinal inner plexiform layer, neurons, brain (neuropil), retinal outer plexiform layer, epiphysis, posterior lateral line nerve, peripheral nervous system, neurites

zna-1

IgG1,k

 

rhombomeres, brain (neuropil), cell somata, growth cones

znp-1

IgG2a,k

cell surface

rhombomeres, retinal inner plexiform layer, brain (neuropil), subset of spinal cord (cellular), ventral root, YSL

znp-4

IgG1

cell surface

retinal inner plexiform layer, brain (neuropil), retinal outer plexiform layer, spinal cord

znp-5

IgG1

cell surface (question)

brain (neuropil), punctate label in medial longitudinal fasciculus, brain (neuropil), lateral spinal cord neurons, spinal cord ventral neurons

znp-6

IgG1,k

 

central nervous system, EVL, gills, lens, myotomes, brain (neuropil), retinal neural layer, lateral spinal cord neurons, somites, spinal cord ventral neurons, visceral organs, YSL

znp-7

IgG1,k

cell surface

brain (neuropil), sensory hair cells, rhombomeres, retinal inner plexiform layer, subset of retinal neural layer and spinal cord (cellular), brain (neuropil), retinal outer plexiform layer, lateral spinal cord neurons, spinal cord ventral neurons, YSL

zns-1

IgG1,k

cytoplasm (question), cell surface

central nervous system, enteric nervous system, ciliary marginal zone, rhombomere, retinal inner plexiform layer, retinal outer plexiform layer, peripheral nervous system

zns-2

IgG1,k

cell surface

brain (neuropil), enteric nervous system, sensory hair cells, hindbrain radial glial cell, retinal inner plexiform layer, olfactory placode, retinal outer plexiform layer, actinotrichia

zns-5

IgG1,k

cell surface

cranial ganglia, central nervous system, enteric nervous system, fins, sensory hair cells, rhombomeres, retinal inner plexiform layer, retinal outer plexiform layer, inner ear, peripheral nervous system

zns-6

IgG1,k

 

central nervous system, ectoderm, rhombomeres, retinal inner plexiform layer, myotomes, brain (neuropil), retinal outer plexiform layer, radial glial cells

zns-7

IgG1,k

cytoplasm

central nervous system, DEL cells, oral epithelium, EVL, gut, horizontal myoseptum, lens, myotomes, brain (neuropil), notochord, somites, YSL

znt-1

IgM

cytoplasm or extracellular matrix

actinotrichia of median finfold, neural crest cells, retina, apical ectodermal ridge of pectoral fin, sensory hair cells, retinal inner plexiform layer, lens, myotome, brain (neuropil), notochord, subset of inner ear

znu-2

IgG1,k

 

subset of brain (cellular), DEL cells, EVL, lens, retinal neural layer, Rohon-Beard neurons

zpr-1

IgG1,k

cytoplasm (question)

retinal photoreceptor cell layer, epiphysis

zpr-2

IgG1,k

cytoplasm

retinal photoreceptor cell layer, epiphysis

zpr-3

IgG1,k

cytoplasm (question)

retinal photoreceptor layer, photoreceptor outer segment layer

zrf-1

IgG1

cytoplasm (question)

dorsoventral diencephalic tract, gut epithelium, Muller cells, notochord, radial glial cells in rhombomeres and spinal cord, ventral roots

zrf-2

IgG1,k

cytoplasm (question)

radial glial cells

zrf-3

IgG1,k

cell surface

unidentified structure close to meninx primitiva, radial glial cells in rhombomere , retinal inner plexiform layer, retinal outer plexiform layer, posterior lateral line nerve, radial glial cells, lateral spinal cord neurons

zrf-4

IgG1,k

cell surface

central nervous system, radial glial cells in rhombomeres, optic nerve (cranial nerve II), radial glial cells

zs-3

IgG1,k

cytoplasm

retinal neural layer

zs-4

IgG1,k

cytoplasm

central nervous system, DEL cells, EVL, lens, lens epithelium, musculature system, YSL