Linkage Group 19
- barbara
Linkage Group 19 SSR Markers
We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.
Marker |
Linkage |
Forward Primer Sequence |
Length |
Reverse Primer Sequence |
Length |
AB_1 |
AB_2 |
In_1 |
In_2 |
Comments |
dbSTS |
|---|---|---|---|---|---|---|---|---|---|---|---|
Z1799B |
19 |
AGCGCTCCTCCGTCTGCTGT |
20 |
TCCGCGTCCATCACTGCGGG |
21 |
NA |
NA |
NA |
NA |
|
|
Z7 |
19 |
TCATGAGCAGCGTTTTTCC |
19 |
AAAGCACCATCCCACAAAAC |
20 |
147 |
|
143 |
|
|
|
Z160 |
19 |
CGCTACCTGAAGGACACCAT |
20 |
CTGCTATTGCTATACTTGTGGGG |
23 |
NA |
NA |
NA |
NA |
|
|
Z553 |
19 |
GGCGTAATCCTCATTCCTGA |
20 |
CAAACTGTGTTGTGTGTTTTTCTG |
24 |
NA |
NA |
NA |
NA |
|
|
Z1234 |
19 |
CATTTAGATTAGGCCTTCCGG |
21 |
TATTACTGTTTACTTTCAGTGTGGCC |
26 |
NA |
NA |
NA |
NA |
|
|
Z1247 |
19 |
GGAGGAGCAGCTCTGCAG |
18 |
GTTAACCACTGAGACACCACTCC |
23 |
NA |
NA |
NA |
NA |
|
|
Z1271 |
19 |
CCGACGAGACCAAGATCAAG |
20 |
GTGACATCAAGTGTGTATCCGG |
22 |
NA |
NA |
NA |
NA |
|
|
Z1422 |
19 |
ACTCATGCATGAGGTCAGTCT |
21 |
TCATTAAACAAAGATGTGATGCTAA |
25 |
NA |
NA |
NA |
NA |
Use at your |
|
Z1544 |
19 |
ATCGGGAACTTCCTGAACG |
19 |
GATCGAAGCCCTTAGCCTG |
19 |
NA |
NA |
NA |
NA |
|
|
Z1625 |
19 |
TGGGATACCTGACATCCAGACC |
22 |
GCTTGAGTGAGGACGCGGTT |
20 |
211 |
|
167 |
|
|
|
Z1628 |
19 |
CAGTATCAGCACACGTGCATGC |
22 |
CCGTATGAGGATGTCCACGC |
20 |
186 |
|
166 |
|
|
|
Z1632 |
19 |
GCGCATCCTCCTCCTCATCT |
20 |
TCAGATCTCCTTCAGCCTGTCA |
22 |
NA |
NA |
NA |
NA |
|
|
Z1651 |
19 |
CAGGTACAGCAGTTCCCCATG |
21 |
CACGTACAGCGTCAGCCTGT |
20 |
NA |
NA |
NA |
NA |
|
|
Z1803 |
19 |
CAGAACCCTGCTGTTCCAGAA |
21 |
AGGTGCACCGTCTGGATCTT |
20 |
189 |
|
175 |
183 |
|
|
Z3023 |
19 |
AGTTTCATTGTCCAATCACTGTAC |
24 |
GGACTGCAAAAACTTTGAAGCTC |
23 |
NA |
NA |
NA |
NA |
|
|
Z3086 |
19 |
CGAAATCCCCTGAAATCTGCC |
21 |
CACACTATGCAGCTCAGGGGC |
21 |
NA |
NA |
NA |
NA |
|
|
Z3214 |
19 |
CGTCATTGTGAGTCACTGCTGA |
22 |
TTACACAGCCCAGCAGTCCG |
20 |
NA |
NA |
NA |
NA |
|
|
Z3384 |
19 |
TATTAGAGGTCTGCATTTCCG |
21 |
CTATTGCACAGACAGCATCACA |
22 |
137 |
169 |
n |
|
Use at your |
|
Z3606 |
19 |
AGACAGTTTGTGTATGCGTGCG |
22 |
AATCACTCCTCATTGGCTGCTG |
22 |
160 |
178 |
n |
|
Use at your |
|
Z3770 |
19 |
AAAGCCTGAGGGACGCACAG |
20 |
TTCAGTGAGGGGTAACGGTGG |
21 |
NA |
NA |
NA |
NA |
|
|
Z3782 |
19 |
AATTCTGGGGGGTAATTCTGGC |
22 |
AAGGGGGCTAAACCTTCAACTG |
22 |
93 |
115 |
143 |
201 |
|
|
Z3816 |
19 |
AGATCAGGTGCACAGTGGCG |
20 |
CCACTGAAGGGCAAGTGGCT |
20 |
NA |
NA |
NA |
NA |
|
|
Z4009 |
19 |
TAATGGTTGCCCCGTCCATC |
20 |
TCATGCTGCAAACCCCAGTC |
20 |
281 |
|
233 |
|
|
|
Z4374 |
19 |
GCATCTTGACTGTGAAAGT |
19 |
TTCTGTTGGCTATAATAAGG |
20 |
NA |
NA |
NA |
NA |
|
|
Z4379 |
19 |
TCACACGCCGATCCACATTT |
20 |
TGAATGGTCCCGTTTGTCATT |
21 |
NA |
NA |
NA |
NA |
|
|
Z4825 |
19 |
AAGCTGCATCCCATCACTG |
19 |
AGAACGGCTAAATTTGGTTGG |
21 |
NA |
NA |
NA |
NA |
|
|
Z5183 |
19 |
ACAATCACTTTTGCTCTGGGCC |
22 |
CCGCCATTGCAAACAGTCAC |
20 |
147 |
|
143 |
|
|
|
Z5352 |
19 |
TTGCCCTGCTATCAAGGGTTG |
21 |
CGTGCATCCAGCAACCAATC |
20 |
149 |
|
147 |
151 |
|
|
Z5583 |
19 |
CGGAGCCACTCAGATCAGCA |
20 |
ACCTCTGAGAACGCAGGTTTGG |
22 |
NA |
NA |
NA |
NA |
Use at your |
|
Z5675 |
19 |
GATGAGGGTGGGCTGGTTTG |
20 |
TGACCCCTGTTTGACCAGTCTG |
22 |
NA |
NA |
NA |
NA |
|
|
Z6045 |
19 |
CTGCAGGCGCAAATATAACA |
20 |
GGGGGGGCTAATAATTCTGA |
20 |
151 |
165 |
149 |
|
|
|
Z6079 |
19 |
TTGTCTCAATGCATCTTGCC |
20 |
AATGCACAAATCGTGAGTAAAA |
22 |
280 |
|
290 |
|
|
|
Z6192 |
19 |
GCGCAGGACTACATCTCCTC |
20 |
TGTCCTTAGGCTGCCTGTCT |
20 |
185 |
|
217 |
|
|
|
Z6275 |
19 |
TGCCATCTTCTCCTGCTGG |
19 |
AAAGCAATGATTTTGCTTGTG |
21 |
239 |
271 |
239 |
245 |
|
|
Z6412 |
19 |
TGCAGAATCATATTCCTGTTCA |
22 |
CAACAACTTCTGATTCATCTGG |
22 |
106 |
|
122 |
168 |
|
|
Z6589 |
19 |
TGTGCTGGAAAGCTCATCC |
19 |
GTGCAGGGGAAGAACAAGAG |
20 |
249 |
|
239 |
255 |
|
|
Z6661 |
19 |
CCTCCAGGATCCTGCAGAAA |
20 |
TTCTCTGACTGCCCTCGG |
18 |
154 |
|
138 |
142 |
|
|
Z7007 |
19 |
TTCAATGAAGATTGGCCTCC |
20 |
TCTCAAATCATTCAGATAGAACCTT |
25 |
? |
|
? |
? |
|
|
Z7058 |
19 |
CTGCAGGCCCTGAACATC |
18 |
AGAGTCTGTGTCAGCCGCTT |
20 |
163 |
|
147 |
173 |
|
|
Z7235 |
19 |
TGATTCAAAGCAGAGGCTGA |
20 |
TTCAAGCACGGATTTGAAAA |
20 |
NA |
NA |
NA |
NA |
|
|
Z7265 |
19 |
GCAGCAACTAATTTGCATTTAA |
22 |
GGTCTCAAGTGTCCCCAGAA |
20 |
155 |
191 |
159 |
195 |
|
|
Z7338 |
19 |
GGGAGAAGCAATGTTTGGAA |
20 |
CATGTGCTCACACAACCACA |
20 |
276 |
|
266 |
|
|
|
Z7430 |
19 |
CTCGCCAGAGACATGTAGTCA |
21 |
CCGGTGCTCATCTGGATC |
18 |
263 |
|
317 |
|
|
|
Z7450 |
19 |
TCTCACTCATCCAGATCATCTATCA |
25 |
TCACTGGTAAACACTGTCAGCA |
22 |
225 |
231 |
177 |
183 |
|
|
Z7686 |
19 |
CACCTCAGTCCTGTGAAGCA |
20 |
CATGTTTGCTCCAAAGAGCA |
20 |
163 |
|
179 |
187 |
|
|
Z7926 |
19 |
GCATCTGTGCATGGGTACAG |
20 |
AATCCATCGCATCTGTTTCC |
20 |
148 |
208 |
184 |
228 |
|
|
Z7948 |
19 |
GAACAGAGGACACCACTGCA |
20 |
TCGACTCTTATTTGCTCCGTG |
21 |
221 |
|
211 |
255 |
|
|
Z7964 |
19 |
CCCATAATGCCTCTGCAGAT |
20 |
TGAAAGGTATGATTGGAACCC |
21 |
186 |
|
234 |
|
|
|
Z7981 |
19 |
TTTTGCACGCACTTCTTCAC |
20 |
TGCAGGATGTTTTATTCTGGG |
21 |
164 |
|
142 |
162 |
|
|
Z8487 |
19 |
CTGGGCAGATGAACCTGAG |
19 |
GGCCTGCAGACTGGTACAGT |
20 |
254 |
|
204 |
230 |
|
|
Z9050 |
19 |
AATCATTCACTTTCACACGGC |
21 |
TGTGAGTCATCAGTGGAAAACC |
22 |
118 |
|
114 |
140 |
|
|
Z9059 |
19 |
TTCCTGGCAATGTTGTTTTC |
20 |
TGCTACTGTTGAAAACACGTCT |
22 |
252 |
258 |
186 |
246 |
|
|
Z9252 |
19 |
TGACAACACTCTGTCAGCACC |
21 |
GCATACAAACAGGGGCAAGT |
20 |
193 |
|
201 |
205 |
|
|
Z9331 |
19 |
GGATAAATCCTGGCCTTTCC |
20 |
CAGACACTGCAGAGCTCGAG |
20 |
275 |
|
269 |
289 |
|
|
Z9384 |
19 |
CACCTTTGCCTTGTTTGGAT |
20 |
AGCATAATCAGACAACCGGG |
20 |
115 |
|
91 |
|
|
|
Z9468 |
19 |
CTGTTTCCATGGAGATGGCT |
20 |
TCTGTATCTCTCACACGCGC |
20 |
157 |
|
161 |
179 |
|
|
Z9512 |
19 |
TGCACACACTCGCATGACA |
19 |
ATGGCCTCTGTGCCTCTG |
18 |
160 |
164 |
162 |
180 |
|
|
Z9595 |
19 |
AAAAACACACATGCACGTGC |
20 |
GTCTTTGCGTGTCTGTGCAT |
20 |
? |
|
? |
? |
|
|
Z9861 |
19 |
TCCACAGCATCGTCCAAAT |
19 |
TGCAGTAAAGCGGCTCTGAC |
20 |
133 |
|
119 |
147 |
|
|
Z9992 |
19 |
CAGTTCATCAACACCCTGCA |
20 |
GGCAGAGTGTGTTTTAGGTGTTC |
23 |
138 |
|
138 |
166 |
|
|
Z10002 |
19 |
CGACGGAGCTTACACAACAA |
20 |
TGATGTCATTGCTCAAAGGG |
20 |
109 |
|
93 |
105 |
|
|
Z10220 |
19 |
GGAATTTCAGCACGGTGTTT |
20 |
GCAGCATTTTCAGAATTGCA |
20 |
275 |
289 |
265 |
283 |
|
|
Z10273 |
19 |
CAGGGGTGTGGCTTATCTGT |
20 |
TCAGCACTGCAGATCTCAGG |
20 |
144 |
|
132 |
148 |
|
|
Z10885 |
19 |
CCTCCGCTCCATTCAGAATA |
20 |
CTCCTCCAATCAGATGTGCA |
20 |
198 |
|
148 |
|
|
|
Z10996 |
19 |
CCAGAACACAGGGCTTTCTT |
20 |
CTTTTTCCTCTCGCGTTTTG |
20 |
139 |
|
159 |
165 |
|
|
Z11027 |
19 |
GCCTTATTTTAAAGAACGCGTG |
22 |
GTAGCAATCAGCAGGGAAGC |
20 |
241 |
247 |
243 |
249 |
|
|
Z11031 |
19 |
TAACGGCATTCCTGAAATCC |
20 |
CACCCAAGCCGCTCTATAAA |
20 |
281 |
|
265 |
271 |
|
|
Z11380 |
19 |
CTGTGCTCAAGAGGAGGGTC |
20 |
AAAGCAGTTCTTTCCCGTGT |
20 |
92 |
|
108 |
|
|
|
Z11403 |
19 |
TTTGTTTTAAGCATTGCCGA |
20 |
GCATTTTGACTCCACTGGGT |
20 |
177 |
253 |
169 |
|
|
|
Z11506 |
19 |
TGATGCGCTTGTTTTTAACG |
20 |
CACTCAGATATGCGTTCATACAC |
23 |
296 |
|
292 |
|
|
|
Z11872 |
19 |
TGTGGAGGAAGAAGGAAACG |
20 |
ATGTGGGAGTTTTGCACCTC |
20 |
135 |
183 |
133 |
143 |
|
|
Z11989 |
19 |
ATGTGTCGACGGTGTGAAAA |
20 |
GCAAGAGTGTGTGCGTGC |
18 |
145 |
|
129 |
137 |
|
|
Z13215 |
19 |
GTGTTGATCCCCTGGGCA |
18 |
ACAAGTCCCCACAAGGTCAA |
20 |
124 |
126 |
118 |
|
|
|
Z13292 |
19 |
CAAGGCTGGCGTTATCAGAT |
20 |
GACCACCCACATAAACCCAC |
20 |
216 |
230 |
224 |
|
|
|
Z13345 |
19 |
TCTGGACTACACTTAACATCACTGC |
25 |
CAAATCAAGACGCTCTTGCA |
20 |
134 |
136 |
142 |
144 |
|
|
Z13509 |
19 |
GTTTCTGGGCTCTGAAGACG |
20 |
AAACAGAGCGTGATGCTCCT |
20 |
270 |
|
264 |
|
|
|
Z13585 |
19 |
ATTCCACAGCCATGTGTCCT |
20 |
GATGTGCCACACCAACAGTC |
20 |
169 |
173 |
163 |
171 |
|
|
Z13727 |
19 |
AGGATGCAGGAGAGTGATGG |
20 |
GGAACCATTAAGAGTCCGCA |
20 |
159 |
237 |
205 |
|
|
|
Z13773 |
19 |
CCCTCTCCTCAACCATAGCA |
20 |
CTGGCATGTAGCACCATACG |
20 |
103 |
|
111 |
115 |
|
|
Z15451 |
19 |
TTGCAGCTACATTTGCGTCT |
20 |
TCAAGAATTGTGTTGTTCCAGC |
22 |
? |
|
? |
|
|
|
Z20054 |
19 |
TGGCTCCCTCACACATTACTC |
21 |
TCATACTGGAGCAGCTGTGG |
20 |
124 |
|
88 |
|
|
|
Z20396 |
19 |
GCCCAAACCTGAGGGATACT |
20 |
GAGCACTTCATGCAGGATCA |
20 |
142 |
|
166 |
|
|
|
Z20773 |
19 |
CAGCACAAATCATTGGCAAC |
20 |
CCCAAAACACACATAAAAACAAA |
23 |
109 |
|
115 |
125 |
|
|
Z21077 |
19 |
CTTTGATACCACCCCAAACG |
20 |
AGGCTCATCAATCCCACATC |
20 |
247 |
|
249 |
253 |
|
|
Z21492 |
19 |
TACGGCACGCAGATGTTAAA |
20 |
CCACGAGTGTTTAGCTGCTG |
20 |
308 |
|
256 |
370 |
|
|
Z21694 |
19 |
GCCTCAGTTTCTGCAGATACTTTT |
24 |
AGGAAAAGCGTGAAAGCTGA |
20 |
126 |
|
134 |
|
|
|
Z22532 |
19 |
GCTGGGAATAAAGGACACCA |
20 |
CAGGTGCTGTTTTCAAGCAA |
20 |
NA |
NA |
NA |
NA |
|
|
Z22649 |
19 |
TGACGTCTGCAGTGAGATCC |
20 |
TACACACACCAGGGGACTGA |
20 |
NA |
NA |
NA |
NA |
|
|
Z22818 |
19 |
AAGAATCCCGGGATGAAGTT |
20 |
TACTCAGAGGCCCTGAAGGA |
20 |
NA |
NA |
NA |
NA |
|
Legend
Table generated Wed Oct 7 16:28:07 1998
