Linkage Group 15
- barbara
Linkage Group 15 SSR Markers
We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.
Marker |
Linkage |
Forward Primer Sequence |
Length |
Reverse Primer Sequence |
Length |
AB_1 |
AB_2 |
In_1 |
In_2 |
Comments |
dbSTS |
|---|---|---|---|---|---|---|---|---|---|---|---|
Z24 |
15 |
CACCTTCACGGTGAGTAGCA |
20 |
GTGGAATGGTGTGACTAATGTCA |
23 |
149 |
169 |
141 |
157 |
|
|
Z37 |
15 |
GGTGTTCGCGACCAAGTC |
18 |
TTTGCGTGGAATTTGAACTG |
20 |
NA |
NA |
NA |
NA |
|
|
Z470 |
15 |
GAGAGCCGAGGTGTGTATGC |
20 |
CACTGCCTATTACACCACTGATG |
23 |
113 |
97 |
99 |
|
|
|
Z732 |
15 |
GTGCCTTCCGTTACCTTCAC |
20 |
TTTTAAGGAAAAAAAGTGAATGCA |
24 |
133 |
135 |
155 |
|
|
|
Z846 |
15 |
CCTCTCAGTCTCCATCACCTG |
21 |
GTGTGTGCTATAATGCCATTGG |
22 |
NA |
NA |
NA |
NA |
|
|
Z858 |
15 |
CTTCCACATGGTCATTATGGG |
21 |
AACCAGTGGAGCGACCAG |
18 |
NA |
NA |
NA |
NA |
|
|
Z940 |
15 |
CTGCTAACCAAATGCAGAAGC |
21 |
TAACCTGATGGAAAATCACACG |
22 |
NA |
NA |
NA |
NA |
|
|
Z1195 |
15 |
AACCCACACCGTCACATCGT |
20 |
ATACGCCACTGACGAGAAGTGG |
22 |
NA |
NA |
NA |
NA |
Use at your |
|
Z3309 |
15 |
CATCCTTCCACACATCTGCAGG |
22 |
TGGAGCTAGCCAGAATAAGCGG |
22 |
NA |
NA |
NA |
NA |
Use at your |
|
Z3358 |
15 |
GCCTTCATCTCGCCACTGGT |
20 |
CGAATTGTTGGGTGAACTAGCC |
22 |
NA |
NA |
NA |
NA |
|
|
Z3735 |
15 |
TCTGGGTGAGCCAGAACATTTG |
22 |
TGTGCGCATGTAGGCGTATG |
20 |
NA |
NA |
NA |
NA |
|
|
Z3760 |
15 |
ACATGGGTGCTCAATCCGCT |
20 |
TCCTTCCCGAACCATCCAGA |
20 |
NA |
NA |
NA |
NA |
|
|
Z4396 |
15 |
GGGATTGTGGTTCTCCACGC |
20 |
AGGCAGCCCTTTCCTAAAGGC |
21 |
NA |
NA |
NA |
NA |
|
|
Z5191 |
15 |
AGTCAGTCAACCCATGCCTGC |
21 |
CGCACATGTGGTTCCCGTAT |
20 |
NA |
NA |
NA |
NA |
Use at your |
|
Z5223 |
15 |
AACAGAGCCGATCTGCCACC |
20 |
AGCACAGCGGAGGAAATAAAGC |
22 |
150 |
178 |
198 |
230 |
|
|
Z5393 |
15 |
CTCCACTCATACACGGACACCG |
22 |
TGGCTGTAATCCGCCACTGA |
20 |
NA |
NA |
NA |
NA |
|
|
Z6024 |
15 |
CTGCAGGCTTAATGCATTCA |
20 |
GGCTCAGCAGTTACATGCAA |
20 |
213 |
|
201 |
225 |
|
|
Z6190 |
15 |
GTGATCAGGGCTGAGGAGAG |
20 |
TAGAGGCCTCCGCTGATGA |
19 |
220 |
244 |
214 |
228 |
|
|
Z6312 |
15 |
TCCTCCTGTGTGTGAACATCA |
21 |
CAGCCATCAGAGAACATCGA |
20 |
189 |
|
207 |
219 |
|
|
Z6418 |
15 |
CACGGCACTTAACAGACAACA |
21 |
TTGCAGACAGTTTCACCTCG |
20 |
199 |
209 |
171 |
189 |
|
|
Z6543 |
15 |
TACTAATTACCCGCCCCACA |
20 |
CGTTTAGTTGAAGTGAAAGGCC |
22 |
124 |
|
134 |
|
|
|
Z6662 |
15 |
CGCACATAATTATAGCGTCAAA |
22 |
TGATGGAGAAATCGTCCCTC |
20 |
NA |
NA |
NA |
NA |
|
|
Z6712 |
15 |
GACAAATTGCACCCTCACCT |
20 |
GCTCGCAGATGTATTGAAAGG |
21 |
287 |
? |
261 |
279 |
|
|
Z6722 |
15 |
GAAAATGGCTTCCGTGCC |
18 |
AACAAATGCAATCACTCACAGG |
22 |
144 |
|
138 |
? |
|
|
Z6895 |
15 |
TGAGCATGTTATGACCCATCA |
21 |
CACTAGGGCCGAGAAATGAG |
20 |
? |
? |
? |
|
|
|
Z7070 |
15 |
TGGGTGGACTGTGCACTTAA |
20 |
GACACATCGACCTTGTGCC |
19 |
144 |
188 |
138 |
|
|
|
Z7216 |
15 |
CACTGAAGCCTGTGAGGACA |
20 |
TCTTGAAGATTGGCATGGCT |
20 |
96 |
|
106 |
152 |
|
|
Z7381 |
15 |
TCCAGTCCACAAAAATGCAA |
20 |
TGACCACAGCAACTCCATTC |
20 |
196 |
|
138 |
308 |
|
|
Z7474 |
15 |
ACACAGACCCGTCCATCTCT |
20 |
CTCAGACTGCCTGCGTACAC |
20 |
72 |
|
76 |
84 |
|
|
Z7501 |
15 |
GGAATTGATTAACTTTTTGGCC |
22 |
TTCTGTTTCATTTCGAGTCTCAA |
23 |
265 |
291 |
277 |
307 |
|
|
Z7815 |
15 |
TGCTAAACGGATGCTCACTG |
20 |
TCTACCAGTTCAGTGCACGC |
20 |
218 |
|
156 |
|
|
|
Z7871 |
15 |
CATCCAGTCGAGTTGGACCT |
20 |
GGATGAGAGACAGTCCGAGC |
20 |
224 |
228 |
230 |
|
|
|
Z8064 |
15 |
ACATTTCGTTTTGTGTGGCA |
20 |
ATCGACCTGGTGCCCTAAA |
19 |
211 |
|
205 |
|
|
|
Z8336 |
15 |
TGCGAGTGAAGAAGGATGTG |
20 |
CAACCCCTCTGCTTTCCTC |
19 |
117 |
|
207 |
|
|
|
Z8467 |
15 |
TTTCCCCGTTGATTTATTCG |
20 |
TTTTGGTTGAGGAAACGCTC |
20 |
245 |
267 |
257 |
319 |
|
|
Z8551 |
15 |
TGAGTGACGTTCTCCTGCAC |
20 |
TTACATCATGACCTGGGCCT |
20 |
215 |
241 |
249 |
257 |
|
|
Z8991 |
15 |
ACCCCTTTTGCCTTTCAGAT |
20 |
CCCCCTCCATTACCTCAGAT |
20 |
277 |
|
223 |
|
|
|
Z9041 |
15 |
TGTTCAGCTCTCACTGGCC |
19 |
AGTGTCCGTCAAACATGAAGG |
21 |
138 |
|
170 |
204 |
|
|
Z9189 |
15 |
CCCTAGTGGTCACCCGTG |
18 |
GGGACACGTGTGTTTGAGTG |
20 |
148 |
|
84 |
|
|
|
Z9214 |
15 |
CCCTTTCATTCCATGGGTC |
19 |
TCTACAATTTGTGATGCGCTG |
21 |
180 |
186 |
184 |
|
|
|
Z9320 |
15 |
TGAGACTGAGCCACTTCCCT |
20 |
ACGAAGATGGCTGTGATATGG |
21 |
129 |
|
127 |
135 |
|
|
Z9488 |
15 |
GAGAGCAGCTCTCAGAGACCA |
21 |
GCTTTTCCTTCACAAGTGGC |
20 |
340 |
|
276 |
|
|
|
Z9738 |
15 |
CAGATCCGGAGCTTCAACTC |
20 |
CAGCCAGCAGTGTAAGCTGA |
20 |
|
|
|
|
|
|
Z9746 |
15 |
CCTTTCTGTTCATGCCCTTC |
20 |
ATGTGGGAATGGAAGTGAGC |
20 |
190 |
206 |
176 |
|
|
|
Z9773 |
15 |
TGAGGAGTTCAAGGCTTGCT |
20 |
CCTGCAGACACCCTGTCTTA |
20 |
194 |
280 |
202 |
258 |
|
|
Z9894 |
15 |
GTGGACGTGAGCGAACACTA |
20 |
GTCCAGGCAGCTCCGAAC |
18 |
145 |
205 |
139 |
201 |
|
|
Z10193 |
15 |
AGCTTGTTTGATGCCCCTAT |
20 |
CTGCAATCCCATTAAGCGAT |
20 |
? |
? |
? |
? |
|
|
10289 |
15 |
CACCATATATGTGTTGTTCTGCA |
23 |
CGACACATCACGCCATTTAC |
20 |
|
|
|
|
|
|
Z10427 |
15 |
TGAGCGCTCTGCTGAACA |
18 |
CTAAGGGCCCACACTGTGTT |
20 |
206 |
|
202 |
|
|
|
Z11320 |
15 |
ACAGGGTAAGCAGGGAAGCT |
20 |
GCAGAGTCCTTCTGTTTTCTCA |
22 |
237 |
|
225 |
|
|
|
Z11323 |
15 |
CACTCCAGAGAGGCGTTTTC |
20 |
CCCAAAGCACATGTTCTCCT |
20 |
190 |
|
176 |
|
|
|
Z11701 |
15 |
GAGCGCTGATAGTCTGGACC |
20 |
ACTGGGCTGCAGATCTGACT |
20 |
280 |
|
360 |
|
|
|
Z13230 |
15 |
TATGAAAAGGCACTTGATGTGG |
22 |
TCTGCGCAGTAATAGCAAACA |
21 |
|
|
|
|
|
|
Z13310 |
15 |
TGGTGATCGTAAATAAAAGAGCTG |
24 |
CACCAGATCCAACCCGTATC |
20 |
132 |
136 |
132 |
134 |
|
|
Z13481 |
15 |
AGGTGAATCAGGTGGAAGGA |
20 |
CGCTCCTCTGTGCAAAATTT |
20 |
? |
? |
? |
|
|
|
Z13705 |
15 |
GTCTCCCATCTGCCTGGAG |
19 |
CAGCTTAGATTTGCACAGCG |
20 |
131 |
|
127 |
|
|
|
Z13759 |
15 |
CGGTGAAACTCCATCCATCT |
20 |
GAGATATGGGGGATTCAGCA |
20 |
102 |
110 |
114 |
160 |
|
|
Z13822 |
15 |
CAAACTGCTACACTCGAGCG |
20 |
GCGGAGCTGAGTGACATACA |
20 |
134 |
142 |
138 |
154 |
|
|
Z13927 |
15 |
AACGTCATGAGTGGGAGGAC |
20 |
ATGACAGTGCGACACAGCTC |
20 |
NA |
NA |
NA |
NA |
|
|
Z15442 |
15 |
GAGTGACCTTTATGGGAGCG |
20 |
AGCACCTGGTTCTGAAAGGG |
20 |
|
|
|
|
|
|
Z17282 |
15 |
TGCGTCTCAAAGAACAGGTG |
20 |
TCTCTCTCATGTTGAGCTCTCA |
22 |
244 |
|
250 |
268 |
|
|
Z20009 |
15 |
GAAGACTTTGGCAGACCTGC |
20 |
GGCGTCACCTCTCAGTTTGT |
20 |
125 |
147 |
111 |
117 |
|
|
Z20627 |
15 |
CAGCAAGGAGTAAAGCGACC |
20 |
CTACGGGCCTGTATCAGTGT |
20 |
163 |
|
189 |
201 |
|
|
Z20632 |
15 |
GAACTCGGACTTTTGCCAAG |
20 |
CTCTGGAGGCAAACCACTTC |
20 |
187 |
|
167 |
|
|
|
Z20637 |
15 |
AACGTCTGATTGGTTCGTCC |
20 |
AGTTCACGTCCGCTCAGATT |
20 |
260 |
|
258 |
278 |
|
|
Z20993 |
15 |
TTAAATTTGATGCATTTTTACACAA |
25 |
TGAAGTGGACCCCTGTCCTA |
20 |
145 |
165 |
237 |
|
|
|
Z21078 |
15 |
GGCCGGAAGAAAATCTCTCT |
20 |
TCCTGTGTTTTCATTGGTGG |
20 |
266 |
|
268 |
324 |
|
|
Z21165 |
15 |
TGTCAGTTCTCTCAGTGGCG |
20 |
AATGGCGCATATAGAAACGC |
20 |
157 |
|
139 |
|
|
|
Z21327 |
15 |
GAAAGGAGTGGCTTTGTTGG |
20 |
GTGGAGGCGGAAGTGTAAAA |
20 |
227 |
249 |
217 |
|
|
|
Z21329 |
15 |
GTCTGCTCCCTCGCTCAG |
18 |
GTGTGATGATGCCAGGTGTC |
20 |
188 |
|
204 |
|
|
|
Z21437 |
15 |
AGAGCTTTGCGTGGCATC |
18 |
ACCCGGAGTGAATCATCAAG |
20 |
176 |
|
174 |
|
|
|
Z21452 |
15 |
GCCAAGAGATTGCACATGAC |
20 |
TGATGCAGACAGGATTCTGC |
20 |
144 |
148 |
164 |
|
|
|
Z21982 |
15 |
TGGAAAAACATGAATGCTGC |
20 |
AACACCTGCTGGGTAAGTGC |
20 |
190 |
|
164 |
|
|
|
Z22027 |
15 |
TTTTTCCAGCAGTGAATACTATTG |
24 |
CGGCGTCTGCAATATAACAA |
20 |
296 |
|
206 |
|
|
|
Z22081 |
15 |
GATTAGAGCGCATTTCCAGC |
20 |
CTGGTGTCAGGGGTGAGTTT |
20 |
116 |
120 |
124 |
126 |
|
|
Z22430 |
15 |
AGTAGAGCCAAGCGCTTCTG |
20 |
GGGTTATGTGGACTCGCAGT |
20 |
223 |
251 |
245 |
|
|
|
Z22738 |
15 |
CGCTGAACTCTCTCTGCATG |
20 |
TGGGTGGAGGACTACCATTC |
20 |
NA |
NA |
NA |
NA |
|
|
GOF18 |
15 |
GACTCTAGAGGATCATTCTGTGGT |
24 |
CTCCAAACGGATTGAGCTCTCTCT |
24 |
174* |
NA |
NA |
NA |
"Goff, et al., |
|
Legend
Table generated Wed Oct 7 16:28:07 1998
