Linkage Group 7
Linkage Group 07 SSR Markers
We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.
Marker |
Linkage |
Forward Primer Sequence |
Length |
Reverse Primer Sequence |
Length |
AB_1 |
AB_2 |
In_1 |
In_2 |
Comments |
dbSTS |
---|---|---|---|---|---|---|---|---|---|---|---|
Z10281 |
7 |
CGTGATCACAGCAGACCG |
18 |
GAGTTTGAGCATCAGGAGCC |
20 |
105 |
 |
103 |
133 |
 |
|
Z10367 |
7 |
TGCCCTTATCTCAAACACCC |
20 |
TGTTCTTTTGTAGCTCAAAAGCTG |
24 |
164 |
 |
158 |
170 |
 |
|
Z10441 |
7 |
GCATTCAGATTCTGGGGTGT |
20 |
CGGATGAACCCATCAATCTC |
20 |
244 |
 |
426 |
 |
 |
|
Z10451 |
7 |
GAGCTTGATTCACACGTCGA |
20 |
CTTTCCCCTGTCAATCCAGA |
20 |
214 |
 |
210 |
216 |
 |
|
Z10457A |
7 |
ATATTTCTCCGGTGGTGACG |
20 |
GCCAAACACACACAGATTCG |
20 |
NA |
NA |
NA |
NA |
 |
 |
Z10487 |
7 |
AATATGCACTGCATGTTGCG |
20 |
GGTTGCCAAGCCAAGTTTAA |
20 |
169 |
205 |
113 |
159 |
 |
|
Z1059 |
7 |
AACAGGTGACAGAGCACACG |
20 |
GGGAGAGGGCAGGACAATAT |
20 |
150 |
 |
125 |
 |
 |
|
Z10780 |
7 |
CAGCAGAACACACGCCTTAA |
20 |
CTGTGTGTCTGCTTTTCCCA |
20 |
248 |
 |
222 |
254 |
 |
|
Z10785 |
7 |
AGGTGGGCAAACACTCAAAC |
20 |
TGTGAGCATTGGGTCACCTA |
20 |
183 |
 |
201 |
 |
 |
|
Z11052 |
7 |
CGTAACTCACTGTGAGCGGA |
20 |
AAGCAAGGCACCTCTGAATC |
20 |
147 |
 |
145 |
 |
 |
|
Z11085 |
7 |
GGTTTGTAACTCCTTGAAGGACA |
23 |
CTCATCTCCACCTCCAGAGC |
20 |
212 |
 |
218 |
 |
 |
|
Z11119 |
7 |
GAAAGGGCTCGATATTGCTC |
20 |
AAAGGACCTTCGCTTTGTGA |
20 |
139 |
 |
135 |
 |
 |
|
Z11122 |
7 |
GCTCTTCTTGTCATTTCTGACA |
22 |
CGGCTGAAAAGAACTGCATT |
20 |
299 |
 |
279 |
281 |
 |
|
Z11359 |
7 |
TCTGTCTGCACTCGGATGTC |
20 |
CCGAGTTCACACTCCACTGA |
20 |
134 |
 |
110 |
122 |
 |
|
Z11545 |
7 |
CTGTTCCTGCAGCTGCCT |
18 |
TCGTTTCCAGCTGTTCACTG |
20 |
139 |
 |
145 |
151 |
 |
|
Z11625 |
7 |
CTGTTGATGTTCGCCATCAG |
20 |
GTGCAAACAGGAGAACAGCA |
20 |
299 |
 |
305 |
321 |
 |
|
Z11660 |
7 |
CGTCTCATTTCTTTGACGCA |
20 |
TCTTCCTCAGGCCGTTTTAA |
20 |
187 |
 |
177 |
 |
 |
|
Z11813 |
7 |
TTGGAGTGAGAGCGAATGTG |
20 |
TGCACAGCATTGACTGATCA |
20 |
241 |
 |
211 |
219 |
 |
|
Z1182 |
7 |
GAGCAGACACTTTACATTTTGTGG |
24 |
GACACTTACAAAGAGTCTTTCATTTCC |
27 |
NA |
NA |
NA |
NA |
 |
|
Z11894 |
7 |
GAGAGTGTCAGCAAGTCCCC |
20 |
AGCAACCGTTCTTGTCGTCT |
20 |
165 |
 |
161 |
163 |
 |
|
Z11982 |
7 |
CTCCATTAAAGCCGATCCAA |
20 |
CCTCGACCTGCTGACGTATC |
20 |
240 |
 |
250 |
292 |
 |
|
Z1206 |
7 |
CGTCTGACAGCCTGCATG |
18 |
CTCGGCGCAGTAGGGAAC |
18 |
NA |
NA |
NA |
NA |
 |
|
Z1217 |
7 |
CGCTTGTCACCAAGGTACAA |
20 |
AACGGAAGTGAATTGCCAAC |
20 |
200 |
 |
180 |
 |
Use at your |
|
Z1224 |
7 |
TCACAGTGGTGTAATGCTGC |
20 |
ACATAGTGGACAAACCTGAACA |
22 |
NA |
NA |
NA |
NA |
 |
|
Z1239 |
7 |
AGGAAAGGCCCTGCCTTATG |
20 |
TGGGCTGTACTCATTTATGTTG |
22 |
197 |
 |
237 |
269 |
 |
|
Z1313 |
7 |
TGGGTTTACAGCAGTTTGACGG |
22 |
GGTCCACCGCAACATCCTGT |
20 |
NA |
NA |
NA |
NA |
Use at your |
|
Z13253 |
7 |
TGTTGATGTTGACCTGGGAA |
20 |
TGCATTTCCTGGATGAGTGA |
20 |
144 |
 |
146 |
 |
 |
|
Z13286 |
7 |
CCCCTCGCCACATATATTGA |
20 |
AAAATGGCGCCAAACTGTC |
19 |
165 |
 |
157 |
161 |
 |
|
Z13729 |
7 |
ACATCCATTCCAGCAACACA |
20 |
CGATCCTGGGCTTTATCTGA |
20 |
? |
 |
? |
? |
 |
|
Z13789 |
7 |
TCAGCTCTGTTTGTGAACGC |
20 |
CTCCAAATTTGCACAAACCC |
20 |
190 |
 |
150 |
 |
 |
|
Z13834 |
7 |
TCCACAACTGAGCAGACCTG |
20 |
GGGTTTGATGTCCATCGGTA |
20 |
? |
 |
? |
? |
 |
|
Z13880 |
7 |
TCCTTGCTTGGAAGAAGAGC |
20 |
AGGGAAAGACACTGAGCGAA |
20 |
? |
 |
? |
 |
 |
|
Z13892 |
7 |
GCTTTTATGGGCTTCTGCAG |
20 |
AACCAGAAACGCAGGAGAGA |
20 |
? |
 |
? |
 |
 |
|
Z13934 |
7 |
GCTGTCCAGTTTTTCCCAGA |
20 |
CGCAGGGCATCCTTTATTTA |
20 |
? |
 |
? |
? |
 |
|
Z13936 |
7 |
TTGGTGACCAGGGTTTAAGC |
20 |
CCACCCTCTTAATTTGGCTG |
20 |
? |
 |
? |
? |
 |
|
Z1535 |
7 |
ACATTTCTCTTACTCTAGTTTTCCCTG |
27 |
TTGGTCCAAACCAGACAACA |
20 |
129 |
 |
115 |
125 |
 |
|
Z15412 |
7 |
CAAGCACGGAGATACAAGCA |
20 |
ACTGCATTCACATCAACACTCC |
22 |
207 |
 |
209 |
 |
 |
|
Z1713 |
7 |
TCATTCACTGAGCCTTCAAGGG |
22 |
ACTCCAGACCCTCCATGGTACC |
22 |
NA |
NA |
NA |
NA |
 |
 |
Z17295 |
7 |
GCTGAAAAGCGAATTTAAGGG |
21 |
GGAAGTGAATTCCAAAGTGACA |
22 |
115 |
 |
199 |
209 |
 |
|
Z177 |
7 |
GGAAACTCTCACGCTCGTTC |
20 |
ACGGATGTTCCTGTAAACGC |
20 |
NA |
NA |
NA |
NA |
 |
 |
Z1798 |
7 |
ATGGCATGCATTTTACTAACGG |
23 |
CGAATCGTGGCCCTGACCGT |
20 |
NA |
NA |
NA |
NA |
 |
|
Z191 |
7 |
AATATAGCGAAGGGACGATCC |
21 |
GAGGACTTCAGCAGAAACCG |
20 |
NA |
NA |
NA |
NA |
 |
 |
Z20421 |
7 |
GAGCACACATCTGCTGGAAA |
20 |
CCTGTGTGGGAGGAAACACT |
20 |
262 |
 |
256 |
282 |
 |
|
Z20495 |
7 |
ATGGAACAGCCACAAAATCC |
20 |
CAAGTGCTGCGAAGTCTCAG |
20 |
249 |
 |
239 |
 |
 |
|
Z20576 |
7 |
CATCCAGTGAGTCTCAGGCA |
20 |
GGGCAATAGGGCTGAACATA |
20 |
106 |
120 |
94 |
 |
 |
|
Z20715 |
7 |
CATCTGTAAGTGCCCAGCAA |
20 |
GTGTCCGGTGAGGCTACAAT |
20 |
130 |
172 |
122 |
124 |
 |
|
Z20853 |
7 |
CTGCAATGATTCGTTTGTGG |
20 |
TCTAAGATCCTCAACCACTTGG |
22 |
176 |
 |
184 |
 |
 |
|
Z20963 |
7 |
CCAAAAGACTGGATGGCTGT |
20 |
CTGAGACGCCCCTACAGTTC |
20 |
221 |
251 |
245 |
249 |
 |
|
Z21393 |
7 |
CAAGCACGGAGATACAAGCA |
20 |
GCCTCGCGGTAATCTACAGA |
20 |
168 |
 |
172 |
 |
 |
|
Z21519 |
7 |
GCCTTTCCCTCCAAATCTGT |
20 |
GGTTGCCTTTTCCTATAAACCTG |
23 |
191 |
 |
221 |
241 |
 |
|
Z21628 |
7 |
GGGGGCAAGACAGTGTTTAA |
20 |
GATGGAGAGAAAGTGAGCCG |
20 |
NA |
NA |
NA |
NA |
 |
|
Z21689 |
7 |
TATCAGACATCATCTGCCGG |
20 |
CATCATGGAACAATTTTCAACC |
22 |
117 |
 |
113 |
115 |
 |
|
Z21714 |
7 |
TATTCTCCGCGTTGTGTGAA |
20 |
TCCCCGCTGTGGAGTAAATA |
20 |
292 |
 |
286 |
304 |
 |
|
Z22040 |
7 |
TGAAACAAATCCAGCACCAA |
20 |
AGCGCCCTTCTTACCTAAGG |
20 |
104 |
126 |
96 |
100 |
 |
|
Z22244 |
7 |
AGAGGAAACCTGCTGGAACA |
20 |
CCAGCCAGATCAGAGACGAT |
20 |
180 |
 |
178 |
198 |
 |
|
Z22628 |
7 |
ATCTGAACAGCCAGAGCCAC |
20 |
TGGAAGACTTTCCACACTCATT |
22 |
NA |
NA |
NA |
NA |
 |
|
Z3008 |
7 |
TGAGACATTGCCTGATTAACTTA |
23 |
AGACACCGGGGCACAGAAGA |
20 |
257 |
 |
189 |
215 |
 |
 |
Z3028 |
7 |
TAAAATAAACCCTGCAGCCGTA |
22 |
ACTGAGCCACCGTGCCACCC |
20 |
246 |
 |
n |
 |
Use at your |
 |
Z3057 |
7 |
AGTCTGTTTGGCCTCAGCGC |
20 |
TCTTGGCGACTGAGTTCTGGG |
21 |
NA |
NA |
NA |
NA |
 |
 |
Z3273 |
7 |
GCAGACACAACTGACGCATT |
20 |
CACCCAGATGTGATTTGCTG |
20 |
NA |
NA |
NA |
NA |
 |
|
Z3445 |
7 |
TTGGGAGACCTACAACCCAGAC |
22 |
GCGTCTCTGGTGGAGGCATA |
20 |
122 |
 |
126 |
172 |
 |
|
Z3668 |
7 |
TCACGTAATTTCGGGTGTTTCA |
22 |
TCATGTAGGACTTTTGCCGCG |
21 |
154 |
 |
124 |
 |
 |
|
Z4375 |
7 |
CAATTTGCTTCTGATTCA |
18 |
ATAGAGATAGGTCAACAATCG |
21 |
NA |
NA |
NA |
NA |
 |
|
Z4507 |
7 |
TCACCCCATATCACTCCACAGC |
22 |
TTCGGGATCTGCAGCGTGTA |
20 |
231 |
 |
223 |
 |
 |
|
Z4706 |
7 |
AGCTGGAAAGCCAGATGCTCA |
21 |
CCCCATCAACAAAGCTCTTGC |
21 |
188 |
 |
200 |
 |
 |
|
Z4999 |
7 |
TCGCTGGTATGACAAACACGTG |
22 |
GGCAGACAGGCAGAAAGGGA |
20 |
NA |
NA |
NA |
NA |
 |
|
Z5450 |
7 |
TGCAGAAGCCTGAAACAGAATG |
22 |
AACACATCAGTAGGCGTGCACC |
22 |
NA |
NA |
NA |
NA |
 |
|
Z5467 |
7 |
AAAGCCCCTGATGAATAATGGG |
22 |
ATCGCTGTTCTCTGGCGACC |
20 |
NA |
NA |
NA |
NA |
 |
|
Z5563 |
7 |
TGCAGGTTGTTCGGTCCTGA |
20 |
TCACAATGCACACAACCCCC |
20 |
258 |
 |
260 |
 |
 |
|
Z5649 |
7 |
TCAGAGTTGCGGTCAAAACATC |
22 |
AATGCATCATCACCAGGCTG |
20 |
NA |
NA |
NA |
NA |
 |
|
Z6273 |
7 |
GCTGTTGCTTGGTGACTGAA |
20 |
CAACTGGAGACAGACTTTGTCG |
22 |
271 |
 |
223 |
243 |
 |
|
Z6483 |
7 |
AGGAAAATGAATGCCCGAG |
19 |
AGCAACGAGTGGCATTCTCT |
20 |
244 |
 |
246 |
248 |
 |
|
Z6523B |
7 |
AGGACGTCACCAATGTTCTC |
20 |
CTTGATAAAGGTGACCCGTACC |
22 |
 |
 |
 |
 |
 |
 |
Z6819 |
7 |
ATTGTCCTGTGGATTCTGTGC |
21 |
CACCTGCTCAATACTTCTGTGC |
22 |
139 |
 |
95 |
105 |
 |
|
Z6852 |
7 |
CATGTGGTACAGTTGAAGGGG |
21 |
ATCATTGGAAACCATCCATACA |
22 |
? |
 |
? |
? |
 |
|
Z6861 |
7 |
CTGCAGTGCAGCACAGGTAG |
20 |
CCTGCATGCAGTCTGACG |
18 |
? |
 |
? |
? |
 |
|
Z7069 |
7 |
CCACACAGACTGACCCCTTT |
20 |
TGGAAAGGAAACTGTCAGGG |
20 |
147 |
 |
129 |
133 |
 |
|
Z7109 |
7 |
CGCCAAATCAAGATACTGCA |
20 |
CGGAAATCGTAATATTGTAAAATGC |
25 |
165 |
 |
203 |
 |
 |
|
Z7244 |
7 |
GTCTCCAATGGCTGAGCAGA |
20 |
GAAGAGCCACCGATGAGTTC |
20 |
122 |
 |
118 |
120 |
 |
|
Z7255 |
7 |
ATGCCCACAAACCTTCCAT |
19 |
ACACACGCGCAGAGATATACA |
21 |
156 |
 |
112 |
 |
 |
|
Z7422 |
7 |
CTGGAGGAGAAAGTCAACCTC |
21 |
CATCTGCTGTGGAGGCCT |
18 |
192 |
 |
180 |
194 |
 |
 |
Z7479 |
7 |
CTGCTGGAGATGAGGGATGT |
20 |
TAGAGCGGATCAACCAAACC |
20 |
137 |
 |
149 |
159 |
 |
|
Z7549 |
7 |
CACTGCATTACTGAAGCCGA |
20 |
ATTGAAGGTGCATGTCGTCA |
20 |
145 |
 |
103 |
115 |
 |
|
Z7555 |
7 |
GGAAAACAGCAGTCTGGAGG |
20 |
GACGGTGAAGGTTCTGGAAA |
20 |
117 |
 |
99 |
101 |
 |
|
Z7562 |
7 |
GCAGTTCACATAAACACTGATGC |
23 |
CAGAGACTCTGCCCCTGAAG |
20 |
175 |
 |
183 |
235 |
 |
|
Z7836 |
7 |
GGGTCTGTCCCTAGTGCTGA |
20 |
TTTGTTCTGACCACCTGCTG |
20 |
NA |
NA |
NA |
NA |
 |
|
Z7875 |
7 |
TGCCGCAAGATGTTTATCTG |
20 |
CTGATCGGCTTGTGTTGAGA |
20 |
164 |
 |
144 |
154 |
 |
|
Z7958 |
7 |
TGTCCCTCTGGAGAGATGCT |
20 |
TCATTCCCAACTCAGAACCC |
20 |
210 |
 |
202 |
204 |
 |
|
Z8145 |
7 |
GCATCTTCAGACAGGACGGT |
20 |
CTGAGGAATATACAGCGCCC |
20 |
253 |
 |
225 |
291 |
 |
|
Z8156 |
7 |
GGCAATGGACTCTTTCAAGC |
20 |
GTTTCATGGCTTACATGCCC |
20 |
208 |
 |
260 |
268 |
 |
|
Z8213 |
7 |
ATGATGGAGGACAGAGCCC |
19 |
ATCTCTCATCACGGCCAATC |
20 |
125 |
 |
119 |
127 |
 |
|
Z8216 |
7 |
CTTAAACCCCACAGTCAGGC |
20 |
GATGCTTTGGATTCAAGGTTG |
21 |
119 |
 |
117 |
123 |
 |
|
Z8218 |
7 |
CCAGAAGTGTGTTTCTACACGC |
22 |
ATGATGTGACTCCCAGAATGC |
21 |
214 |
 |
202 |
238 |
 |
|
Z8252 |
7 |
AGGTGTCATGAGTGCTCTATGC |
22 |
TGCAATTTACACGTTTTTGTCA |
22 |
110 |
 |
106 |
130 |
 |
|
Z8495 |
7 |
TCATAATCATGTGCTCCTCTTGA |
23 |
TTGTTGTTGACGCTGCTTTC |
20 |
246 |
 |
224 |
234 |
 |
|
Z8536 |
7 |
CCAACACTGGATCACACCTG |
20 |
GAAGAGGCCAACACATCTCC |
20 |
NA |
NA |
NA |
NA |
 |
|
Z8540 |
7 |
AAGTCACATCTGGGTACGGC |
20 |
TGCATCACTGAAAATGTGCA |
20 |
181 |
195 |
177 |
189 |
 |
 |
Z8574 |
7 |
GGTTTGAATGGTGGGTGAGA |
20 |
CTCTGAGACCTGCTCCAACC |
20 |
213 |
 |
225 |
 |
 |
|
Z8604 |
7 |
GTGCGTAAATGGATCCCATC |
20 |
TGAAGCAGGACAAAGAGTGC |
20 |
158 |
188 |
154 |
198 |
 |
|
Z8693 |
7 |
GCTTTTTGAGCAGATGAGGC |
20 |
CATGTACGCGTTGACTTTGC |
20 |
176 |
 |
220 |
 |
 |
|
Z8889 |
7 |
ACACACATGGGACAGGGATT |
20 |
CAGGTTAAACCCCTTTGTGG |
20 |
250 |
 |
232 |
 |
 |
|
Z8975 |
7 |
TGTTCAGACCCTGAATGCAC |
20 |
TTCAGTCATTCAGAAGGGGG |
20 |
196 |
 |
136 |
172 |
 |
|
Z9067 |
7 |
TGCACACTGGTGCTGGAT |
18 |
TTGTGTCCAGTGTCTGCACA |
20 |
149 |
 |
175 |
241 |
 |
|
Z9068 |
7 |
TGCGCTTCATCCTCTACTAAA |
22 |
GTGAGCTGCTGCCCTGTG |
18 |
250 |
 |
222 |
236 |
 |
|
Z9133 |
7 |
TTTGATTGTCCCTGCTTTACG |
21 |
AAGCCCCATCTCCAAGAACT |
20 |
233 |
 |
219 |
 |
 |
|
Z9249 |
7 |
AGTGAACGTCGTGCCACTC |
19 |
TAAGAGGGTTGGGTTTCGG |
19 |
195 |
 |
211 |
281 |
 |
|
Z9273 |
7 |
CAGGAGTTGCAGAGTTTGTCC |
21 |
CTTTGATTCAGGTACCATTTGC |
22 |
261 |
 |
247 |
 |
 |
|
Z9323 |
7 |
TGTGTGAGACACAGGTGAAGC |
21 |
AACTGCTCAGATGTGACAGGA |
21 |
190 |
 |
168 |
190 |
 |
|
Z9521 |
7 |
AGATCTCCCACTGACTGCTACA |
22 |
GCTTGAATGGGAATTGGAGA |
20 |
90 |
 |
86 |
102 |
 |
|
Z9804 |
7 |
TGTCCGTGTCAGTTCTGCTC |
20 |
GGAGGAAGTGTTCGGATGAA |
20 |
136 |
140 |
136 |
138 |
 |
|
Z9869 |
7 |
CAACTGGGCAGTTAGGGCTA |
20 |
CAGGGCTGAGGTCACACATA |
20 |
159 |
 |
97 |
113 |
 |
Legend
Table generated Wed Oct 7 16:28:07 1998