Linkage Group 22
- barbara
Linkage Group 22 SSR Markers
We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.
Marker |
Linkage |
Forward Primer Sequence |
Length |
Reverse Primer Sequence |
Length |
AB_1 |
AB_2 |
In_1 |
In_2 |
Comments |
dbSTS |
|---|---|---|---|---|---|---|---|---|---|---|---|
Z178 |
22 |
ACCACAAGCGTGTGAGTCTG |
20 |
TTGACTGTGGCCTGCTGTAG |
20 |
NA |
NA |
NA |
NA |
 |
 |
Z230 |
22 |
GGTTCTCCCACCAGCACTAA |
20 |
CGACTCAGACTTACTGGTGTGC |
22 |
NA |
NA |
NA |
NA |
 |
 |
Z669 |
22 |
GTGTGTGATGTTGTGTTTGTCG |
22 |
GGGGTCACTTCTGTTTACAAGC |
22 |
NA |
NA |
NA |
NA |
 |
|
Z684 |
22 |
GCTACAGCTCGCCTGTGTG |
19 |
ATCCGATACAGCCCGAGTC |
19 |
67 |
79 |
77 |
 |
 |
|
Z938 |
22 |
CAGACGGACAAGTGGAGGAT |
20 |
CAAATGCTTCTCACTTCCTCG |
21 |
NA |
NA |
NA |
NA |
 |
|
Z1148 |
22 |
GGCTACACCTCAAACGCTTC |
20 |
CAACACCTGATCAAACGCC |
19 |
200 |
 |
238 |
 |
 |
|
Z1691 |
22 |
TCAGCGTGGGGCGAGCAGAC |
20 |
ACCGGCAGATCTTTGGACAT |
20 |
NA |
NA |
NA |
NA |
 |
|
Z3093 |
22 |
GTCAGTTGGTGTCCCCCCAC |
20 |
CAGCACAGGTATTATGCAGCGG |
22 |
136 |
146 |
164 |
 |
 |
 |
Z3286 |
22 |
CCACACATAGTGGAACCTGCTG |
22 |
CTGGAAGTTACATGGAGCGTCA |
22 |
94 |
100 |
94 |
98 |
 |
 |
Z3324 |
22 |
AAATCAGTGTCCATAGGCCG |
20 |
TGTGATGCATCAGGTATGAACA |
22 |
NA |
NA |
NA |
NA |
 |
|
Z3579 |
22 |
CGCAAATCAAATCAAAATTGCA |
22 |
GCAGGCCAAGTGCCTTAATG |
20 |
NA |
NA |
NA |
NA |
 |
|
Z4284 |
22 |
TGATTGGAAACCGTCGGGAT |
20 |
TGATGTTGCAAGGACAGGAAGC |
22 |
NA |
NA |
NA |
NA |
 |
|
Z4409 |
22 |
TCGGTCCAGCACATAATCAAGC |
22 |
AGCCTTGGGAGAGGGACTGG |
20 |
197 |
 |
189 |
 |
Use at your |
|
Z4682 |
22 |
AAGCCTGGCATTGTTCAGTCTC |
22 |
TGCCCGTCAGGAAGTCTTTAGG |
22 |
NA |
NA |
NA |
NA |
 |
|
Z4768 |
22 |
AGCAGCCCTGGGATTATGAGC |
21 |
GGGATTACATCCTGGTATCGCA |
22 |
173 |
n |
147 |
n |
Use at your |
|
Z5238 |
22 |
TTCCAAATGTATTAAGGGGGCC |
22 |
GATAATGGCCAGCGACCTAAGA |
22 |
222 |
 |
224 |
 |
 |
|
Z5424 |
22 |
TCCCCAGAGATGAGTTGCAGC |
21 |
TCGAGCCAGAAGACCAAGTGG |
21 |
364 |
 |
360 |
 |
Use at your |
|
Z6374 |
22 |
AGAGTTGGTGGTTCATTCCG |
20 |
TGGAAACCTATGTAATGTCCCC |
22 |
184 |
186 |
186 |
 |
 |
|
Z6507 |
22 |
GCGTAGACCACTCTGCCTTC |
20 |
CATCCATCAAGGCTGCATC |
19 |
320 |
 |
324 |
342 |
 |
|
Z6531 |
22 |
CCTCAATTCACATCCAGCAG |
20 |
TCTGCCGGTTTTCTGTCTG |
19 |
186 |
200 |
248 |
 |
 |
|
Z6613 |
22 |
TGAGGAGATGAAGTTGCACG |
20 |
CCCCAGTGGTTCAACTCG |
18 |
139 |
 |
143 |
 |
 |
|
Z6805 |
22 |
GACATGAAAGAGACGCGTGA |
20 |
GTCAACATGACGAGCACTTCA |
21 |
274 |
 |
336 |
 |
 |
|
Z6850 |
22 |
AGGACTATTTCAACAGCGTGC |
21 |
TACTCCAGCATCTTCCACCC |
20 |
? |
 |
? |
? |
 |
|
Z7125 |
22 |
CTGAGAGACCAGGTGAAGGAA |
21 |
AGACACATTTTACTGCCCCG |
20 |
236 |
 |
184 |
200 |
 |
|
Z7152 |
22 |
TTTTTACGCATCGACCTATAGGA |
23 |
CGTTTCTGCAGGTGAGTCAA |
20 |
216 |
238 |
206 |
 |
 |
|
Z7354 |
22 |
GAGATGTGTGATTGCGCACT |
20 |
GGATACGCAAAATGTACCCG |
20 |
200 |
 |
218 |
 |
 |
|
Z7662 |
22 |
CTGACGGGTCACTGGACC |
18 |
GAAAGACTGACCAGCAGGTTG |
21 |
248 |
256 |
230 |
 |
 |
|
Z8369 |
22 |
CCGGCTGAGACACGATTC |
18 |
CTGACGGGTCACTGGACC |
18 |
123 |
 |
105 |
 |
 |
|
Z9084 |
22 |
GGGACATGATGAAGCAGGTT |
20 |
CAGCAAAAATCCCAGCAAAT |
20 |
NA |
NA |
NA |
NA |
 |
|
Z9402 |
22 |
GGCCACTTTATTGGATTACAGC |
22 |
TCATGAAAAGCGAAATATGACC |
22 |
134 |
148 |
132 |
 |
 |
|
Z9516 |
22 |
GCGTATTTAGCGTCCTGCTC |
20 |
CGCTCACAGGAGATCATGAA |
20 |
182 |
n |
202 |
218 |
 |
|
Z9752 |
22 |
TGCCATTCCAGGTGTGTATC |
20 |
CACGTGTCGTCTGAGAAGGA |
20 |
258 |
268 |
260 |
272 |
 |
|
Z9817 |
22 |
AATCAGGTCAAAATCTGTCAGG |
22 |
GTAACGCTGTACAGACCCCC |
20 |
? |
 |
? |
 |
 |
|
Z9970 |
22 |
ATCTCTATCTGTGGGCAGCG |
20 |
CTCTTTGGCCAGTAGGCAAG |
20 |
243 |
? |
239 |
 |
 |
|
Z10028 |
22 |
TGTGGCTCTGATCATCCAAA |
20 |
GGGAGTGTGCCCTAGTGTTC |
20 |
248 |
254 |
268 |
 |
 |
|
Z10321 |
22 |
CTCTCCGGTCTCCACAAGAG |
20 |
TGCGACGTCCTTCTACAATG |
20 |
175 |
 |
161 |
 |
 |
|
Z10324 |
22 |
GGCGTGAATGTGGGAATATC |
20 |
CAATCGTGGCTCCTCTCTTC |
20 |
273 |
321 |
341 |
 |
 |
|
Z10550 |
22 |
CGAACAGCTCCTCTTGGTTC |
20 |
GCAAAACATGTCAGAAATGTGC |
22 |
209 |
 |
227 |
 |
 |
|
Z10673 |
22 |
GGCGGGTGACTTGTAGTGAT |
20 |
AGCGGTGATTTCAGTGCTTT |
20 |
276 |
 |
240 |
244 |
 |
|
Z10788 |
22 |
CTCCAGCACGTATCTGTCGA |
20 |
CCGCCCTCTGTATGAGTGTT |
20 |
209 |
227 |
229 |
 |
 |
|
Z11042 |
22 |
TTCTCGCTGGACAGGAAGTT |
20 |
GTGGAGGTTCAAGACACGGT |
20 |
133 |
 |
153 |
 |
 |
|
Z11053 |
22 |
CCACGATCCTGACTCACAAA |
20 |
GTTCAGCACATCCTCCTGGT |
20 |
277 |
 |
179 |
 |
 |
|
Z11262 |
22 |
ATTCACAGGGCACAGTTTCC |
20 |
GATCCAGGAGTGCGAAGATC |
20 |
217 |
299 |
245 |
 |
 |
|
Z11379 |
22 |
AATAAAGCTGGGGGCTTGTT |
20 |
GGAGGATGGAGACATGGAGA |
20 |
107 |
133 |
117 |
139 |
 |
|
Z11679 |
22 |
GGCATTTAAACGGCACACTT |
20 |
GCTTTTGCGTGTGAACAGAA |
20 |
185 |
 |
187 |
199 |
 |
|
Z11752 |
22 |
CTGATGACGAAATACCGGCT |
20 |
GCCACAGCTCTTCATCTATATTG |
23 |
150 |
164 |
140 |
 |
 |
|
Z11753 |
22 |
CAACTGGGTCACTGTGTTGC |
20 |
AGCAAGAAGATCTGCAGCAT |
20 |
143 |
 |
129 |
 |
 |
|
Z13223 |
22 |
TCTGACTTTGCTGAGCTGGA |
20 |
CCAAGAACCATTAGAAACTGCA |
22 |
210 |
 |
152 |
154 |
 |
|
Z13529 |
22 |
CCAAGGGAAGTTAACAGAACG |
21 |
GAGCTTCAAGGCTCCTCAGA |
20 |
267 |
 |
283 |
 |
 |
|
Z13794 |
22 |
GCTGGTTGAATGAGGGTTGT |
20 |
TGACAGCAGTTGCGGATTAG |
20 |
226 |
228 |
213 |
230 |
 |
|
Z13803 |
22 |
AGCTGCGCAAGACAGCTTAT |
20 |
CATGTGGTCATGTCTCCTGG |
20 |
152 |
158 |
146 |
 |
 |
|
Z13966 |
22 |
TTGGTTCACACTTCAGCCTG |
20 |
CATCCTGTAAATGCACACGC |
20 |
? |
 |
? |
? |
 |
|
Z20082 |
22 |
GGCACACACATATCAGCCTG |
20 |
TTAAAGCTTCGGGTGAGGTG |
20 |
120 |
? |
104 |
108 |
 |
|
Z20168 |
22 |
GACGGAGAGTATCTGGGCAC |
20 |
AGACGTCAGACCATCCAACC |
20 |
213 |
 |
229 |
 |
 |
|
Z21243 |
22 |
TCGACATGCCAATAACACGT |
20 |
TGACACATTCAGTGGCCATT |
20 |
201 |
 |
179 |
199 |
 |
|
Z21252 |
22 |
TAACCATCCACCCTGAAAGC |
20 |
ATGTCATACCCGGAGAGACG |
20 |
NA |
NA |
NA |
NA |
 |
|
Z21507 |
22 |
TCCAGACTACAATGATGGTGCT |
22 |
TAAAGTGGCTGCCAAATGGT |
20 |
NA |
NA |
NA |
NA |
 |
|
Z22419 |
22 |
ATTCGCAGGCTAAACATTGC |
20 |
CTGAACACGTCACACACGTG |
20 |
158 |
 |
160 |
 |
 |
|
Z22935 |
22 |
GGAATCTAGCAGCCCCTCTC |
20 |
CATAGCGACAAAGAGGAGGC |
20 |
NA |
NA |
NA |
NA |
 |
|
Z23048 |
22 |
CAAAGCAGAGCTGTTTTCCC |
20 |
TCCCTCGTGATGAAGTTATGC |
21 |
NA |
NA |
NA |
NA |
 |
Legend
Table generated Wed Oct 7 16:28:07 1998
