Linkage Group 10
- barbara
Linkage Group 10 SSR Markers
We are in the process of submitting the sequences used to generate the SSR markers to the dbSTS database at NCBI. To view the entry for a specific sequence, use the link in the dbSTS Accession column. If no link is present, we are still preparing its entry for submission.
Marker |
Linkage |
Forward Primer Sequence |
Length |
Reverse Primer Sequence |
Length |
AB_1 |
AB_2 |
In_1 |
In_2 |
Comments |
dbSTS |
|---|---|---|---|---|---|---|---|---|---|---|---|
Z355 |
10 |
CAGCCTGAGCACACAGAGAC |
20 |
GCACAGGCCTAATAAGACGC |
20 |
NA |
NA |
NA |
NA |
 |
 |
Z531 |
10 |
GCAGGTTGCTCTGGTTTCTC |
20 |
TTTCCGATGACAGATCGTGA |
20 |
118 |
 |
126 |
 |
 |
|
Z744 |
10 |
TATACTGCTTATTGGTGAAATCCG |
24 |
CTGTACAGCCCAGACAAGAGC |
21 |
115 |
145 |
93 |
159 |
 |
|
Z1145 |
10 |
GGGAACGACCCTTTTCAATT |
20 |
TCCAAGTTGGCATAGATGTATCT |
23 |
199 |
 |
147 |
211 |
 |
|
Z1296 |
10 |
GCCTCATTTCTCTCGTACGC |
20 |
TGGGTGGGCTGTTTCAGT |
18 |
258 |
 |
250 |
 |
 |
|
Z1450 |
10 |
AACGTGTGTTCAGGACAGTGGC |
22 |
AGAGGGAAGGTCAGCAGGAAA |
21 |
238 |
250 |
206 |
220 |
 |
|
Z3054 |
10 |
GCTCAGTGGAAAAACAATGAAAG |
23 |
CGCGCTTAAATCGATCAATGC |
21 |
NA |
NA |
NA |
NA |
 |
 |
Z3260 |
10 |
GCTGGTCTTCATCCCAGAATGG |
22 |
TGGTCGGTGAGTTTTTACAGCC |
22 |
NA |
NA |
NA |
NA |
 |
 |
Z3455 |
10 |
GGGTGGGGTGAGGGCAATAT |
20 |
AACGAGGCCAGTCAGTAATGGC |
22 |
NA |
NA |
NA |
NA |
Use at your |
|
Z3835 |
10 |
TCACCATTTTCACAAATTGGCA |
22 |
AAATGGAGATTCCGCTAAAGCA |
22 |
122 |
132 |
230 |
 |
 |
 |
Z4738 |
10 |
CACAGCGGATGCTCTTCC |
18 |
GTATAGGGGAACTAAATCGGCC |
22 |
150 |
 |
172 |
 |
Use at your |
|
Z6183 |
10 |
TTCACATGTCTGGAATGGACA |
21 |
CGCATTAATCTGGAGAGAACTG |
22 |
152 |
 |
102 |
116 |
 |
|
Z6195 |
10 |
CACTGTCATCAACCCATTTCC |
21 |
ACCTTTAGAGACAGAGGAGCAA |
22 |
NA |
NA |
NA |
NA |
 |
 |
Z6346 |
10 |
CTTCAGGAGTCGTCAGGATTG |
21 |
TTATGAGCCACAATCTGGACC |
21 |
189 |
 |
153 |
165 |
 |
|
Z6390 |
10 |
GGCCTTCGATCCAAAGATCT |
20 |
GTGCCTATCGAGGAGTCGAC |
20 |
132 |
148 |
128 |
132 |
 |
|
Z6410 |
10 |
TCTGATTATTCTCACCTGCCG |
21 |
ATCAAACACATCTGCTCCCC |
20 |
156 |
 |
142 |
162 |
 |
|
Z6427 |
10 |
CATGCATGCACAAATGCAC |
19 |
GTGCGCATTTTCAACTCTGA |
20 |
132 |
n |
144 |
180 |
 |
|
Z6648 |
10 |
ATGTCCTCCAGGGAAATGTG |
20 |
ACAGCCTGCAGAAAACACAT |
20 |
252 |
288 |
202 |
? |
 |
|
Z6754 |
10 |
TTGAATGCTTCGTTTAGGAATG |
22 |
CAGATCCCATGTGCAGAGC |
19 |
138 |
 |
124 |
128 |
 |
|
Z6992 |
10 |
GTCCATGTAACCTTTGCATGC |
21 |
ATTCATGTTTTGCTTTCCGC |
20 |
? |
 |
? |
 |
 |
|
Z7028 |
10 |
CAACACCAGCATAGCCATGT |
20 |
TGTGACAAGGTCAGTGGAGC |
20 |
151 |
237 |
147 |
207 |
 |
|
Z7088 |
10 |
TCAATTAAAGAGCCTGACGAG |
21 |
AGTGTGTTTGTGTGCATTTGTG |
22 |
261 |
 |
257 |
 |
 |
|
Z7123 |
10 |
TGTCAGTCCAGATGTGTAACGA |
22 |
TCATGTTCTCCGGATCATCA |
20 |
277 |
283 |
269 |
275 |
 |
|
Z7262 |
10 |
CATGTGCCTGCGAGACAC |
18 |
TTTTTCATTTGCAGGCAGC |
19 |
413 |
 |
355 |
 |
 |
|
Z7316 |
10 |
GTGGACATTTGGGGTGAAAG |
20 |
GAGGTTTTGCGCTGATGAAT |
20 |
NA |
NA |
NA |
NA |
 |
|
Z7388 |
10 |
TCAAGGCAAAACATTAAGGTGA |
22 |
CACCCCTGATCCACACTCTT |
20 |
264 |
 |
228 |
234 |
 |
|
Z7504 |
10 |
AATTGGGCTGCGTTTCATAC |
20 |
TTCCACCTCCTGTAACCTGC |
20 |
160 |
176 |
168 |
196 |
 |
|
Z7558 |
10 |
TGGCTCATCTGATATTGCCA |
20 |
AGAAACAAACCGACCATTGC |
20 |
180 |
 |
188 |
 |
 |
|
Z7810 |
10 |
GTTCTTCCTCTTTCCCCAGC |
20 |
ATGAACACGCGTTCACTCAG |
20 |
161 |
171 |
161 |
163 |
 |
|
Z8146 |
10 |
AGCGGAGATGATGACTTGGT |
20 |
TCCGCCTCTAGAGAGACTGC |
20 |
142 |
160 |
146 |
 |
 |
|
Z8220 |
10 |
CAGCATCAAATATTTGTGTGGG |
22 |
CTTTTGCATACAATGCACATCA |
22 |
220 |
 |
214 |
 |
 |
|
Z8249 |
10 |
CCAGTGTGTTACCGTGCATC |
20 |
ACCGTGTCAGAGAGTCAGAACA |
22 |
197 |
 |
183 |
227 |
 |
 |
Z8318 |
10 |
ATGCCACAACAATTGTTCGC |
20 |
AAGAAAGCACGCGCACAC |
18 |
190 |
 |
194 |
 |
 |
|
Z8463 |
10 |
TCTCTCCATCTGGGTTCCAC |
20 |
CTTCGGAGGACGAGACAGAC |
20 |
206 |
 |
214 |
285 |
 |
 |
Z8705 |
10 |
CACTGCAAATGCCAATCATC |
20 |
TCAGATGGTGAGAGCACAGC |
20 |
231 |
249 |
227 |
285 |
 |
|
Z8988 |
10 |
TCTGAGGAAAGAGGAGCCTG |
20 |
CAGAACACACTCCGTCTCTCTC |
22 |
241 |
299 |
271 |
n |
 |
|
Z9096 |
10 |
GCTGATCCCATCATGCTTTT |
20 |
AATAAGGGACTAAGCCGAAAGG |
22 |
234 |
n |
270 |
 |
 |
|
Z9199 |
10 |
GAGCCGCTTACATCTGAAGC |
20 |
CTGCACGTCCACTCAGCTT |
19 |
186 |
232 |
184 |
191 |
 |
|
Z9208 |
10 |
GTGCCGTGCTCTCACTCAT |
19 |
CTGCAGACTGTCACCTGTGC |
20 |
159 |
201 |
171 |
178 |
 |
|
Z9328 |
10 |
CTTTCACAACATTTTCATTCGC |
22 |
CCAATCAGGAACTGAGGGAA |
20 |
176 |
232 |
174 |
219 |
 |
|
Z9413 |
10 |
ACTTCCGTCTGCTGGAGAGA |
20 |
TAAGCTACGGCCACTGCA |
18 |
219 |
221 |
217 |
284 |
 |
|
Z9436 |
10 |
AGACACACTCTGGACACCCC |
20 |
GGAGGAACTCGCCATTTACA |
20 |
162 |
 |
150 |
 |
 |
|
Z9473 |
10 |
TGCTGTCTTCTGTCAGGAGG |
20 |
GGAGCAGCTGGATACGACTC |
20 |
249 |
259 |
261 |
 |
 |
|
Z9574 |
10 |
CTGCTTCAACTGTGTCATGTCA |
22 |
GGCCTCTGTTACATAGACATGG |
22 |
? |
? |
? |
 |
 |
|
Z9701 |
10 |
CACTGATGCTCTCACCTCCA |
20 |
ATGCTTGTGTGGGTGTCTCA |
20 |
125 |
 |
103 |
 |
 |
|
Z10143 |
10 |
ACATGCATGCTGAGAGCATC |
20 |
CATCGCCGAGTCTGTCAGT |
19 |
137 |
 |
159 |
 |
 |
|
Z10251 |
10 |
GCTCAAGGACAACTCCGAAG |
20 |
CAGTAACACGGGGAAACGTT |
20 |
328 |
 |
252 |
256 |
 |
|
Z10279 |
10 |
CTGATGTCACAGCGGAGTGT |
20 |
AACATCCAGGTGAGCCAATC |
20 |
250 |
 |
268 |
274 |
 |
|
Z10384 |
10 |
CCAATCAGGAACTGAGGGAA |
20 |
CGGGACAGACTTGAGTGTGA |
20 |
208 |
262 |
206 |
210 |
 |
|
Z10647 |
10 |
TGCTGCAAAATAAAACAGTGTG |
22 |
TGTGTTTGTGTTCAGCGTCA |
20 |
174 |
 |
200 |
266 |
 |
|
Z10765 |
10 |
ATCCAGGTTGACAGACGTCC |
20 |
GCGGGTAGAGCTGTATTTGG |
20 |
273 |
299 |
259 |
273 |
 |
|
Z11229 |
10 |
GCAGGAAAGCCAGAATGAAG |
20 |
CACAAGACAGCGAACAGGAA |
20 |
114 |
 |
136 |
 |
 |
|
Z11602 |
10 |
ACGCTTGAGCCTGAGACAAT |
20 |
AGGATCCATTTGCGTGTCTC |
20 |
200 |
 |
204 |
 |
 |
|
Z11911 |
10 |
AATCAGCCAGCTGCATCTTT |
20 |
TATAAACGGCTCCCTTCCCT |
20 |
258 |
 |
224 |
 |
 |
|
Z13219 |
10 |
CAAAAACAGCAGTATCCGCA |
20 |
GGTCCCCATACAGCTGACAC |
20 |
200 |
214 |
178 |
184 |
 |
|
Z13314 |
10 |
CTCCAGCCAAAGAAAACGAG |
20 |
GGAGGCTCAGACAGGTGAAG |
20 |
153 |
155 |
151 |
161 |
 |
|
Z13632 |
10 |
AGGATGATGAAGACGGATCG |
20 |
TCGCCTGAGGTGAGTTTTTC |
20 |
262 |
264 |
306 |
 |
 |
|
Z13685 |
10 |
TCCAATGCACAGGTAAACCA |
20 |
AATGAGTTTCAGTCCACCGC |
20 |
285 |
 |
293 |
 |
 |
|
Z13875 |
10 |
CTCCCAAGAGCCGTACACTC |
20 |
CAGCCTTTAATGGACACCGT |
20 |
? |
? |
? |
? |
 |
|
Z14193 |
10 |
GCTGCTCATGCAATGGTAGA |
20 |
GTGAACCTGACCGACCTGAT |
20 |
? |
 |
? |
 |
 |
|
Z15444 |
10 |
GTCCCGCTGCTGATCTAAAG |
20 |
TCCCCCGTCCTCTAAAGTTT |
20 |
NA |
NA |
NA |
NA |
 |
|
Z17219 |
10 |
CCACAGTCCACCAAGACATG |
20 |
GCTACAACACAGCTCGTGGA |
20 |
179 |
 |
157 |
 |
 |
 |
Z21976 |
10 |
GCGCTCTTGTTTGACCTTTC |
20 |
CCGCAGTGTCAGCAGAAAT |
19 |
101 |
 |
105 |
 |
 |
|
Z22422 |
10 |
CCCTTGAGCAAGGCATTTAA |
20 |
TCGGTATTGGCAAGTAAGGG |
20 |
218 |
 |
174 |
202 |
 |
|
Z22661 |
10 |
CCTATGCACTTTGCCCCC |
18 |
CATCAGGCATGATTCTGTGG |
20 |
NA |
NA |
NA |
NA |
 |
|
Z22928 |
10 |
GGTGCAGAGTCATGCTTTGA |
20 |
TTGTTCTGGTTGTGCTGGAG |
20 |
NA |
NA |
NA |
NA |
 |
Legend
Table generated Wed Oct 7 16:28:07 1998
